LOC110500686 (LOC106608678)


Basic Information

Item Value
gene id LOC110500686
gene name LOC106608678
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51316814 ~ 51332192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021578185.2
gagagagagcgagggggagcgagcgagagagagagagcgagcgagagagagaccgagagagacagagtgtgagaGTCGCTCCTGCCCTCTGTCTTTACACACTGCTGCCTGTGTGTGCGCCGTCTCTCCTTgcctgcactctctcacacacacacactcacgcagacGCACGCTCACACAGACCGAGGGAGAGAGCGGatagagcgagcaagagagagaggagggagaacacATCGCAGCAGAGATGCAGCAGGAGGTTTTCCGAGGTTTTGGGGGCTGGTCATGGTGTCCTGGCTGGAGGTGTTGGACCCCCTCCACGCAGGCCTCTTCTTGCTACGCCTGAACGAGCAGCACCTGCCCGCCGGGCCCACCCTCTTCTGTGACGTCAACCTCATCGCCACCAGCGACGCCAAGTTGGCCGCCTGCTGCCAGTACTTCCGCCAGCTGCTGCTGTCGACGTCTTCCCCACCGCCTACGACTCCTGTATTAGGCAGCCACCACCCGCCGTCTACCCCCTCTTCCAGGCTCATCCAGGGGGCTGAGCTGGACCTGCCTAACCTCCAGTCCTGTGTGCTGTCCAACCTGCTTGACTTCATCTACTCCTCCCGTGTTGCCCGCAAGGGCTCCAAGGGGACCAGGCATCTGTCGGAGGCGGGCCTCAGCCTTAGAGTGCCCATCTTGACCAATCTGgttgaggaagaagaggaggcggAACCAGGGCAGATGAAGGGTAAAAGCCGGCAGTGCCGAGGAGGGGAGGCCATGATGGAGGGGCTGATGAATGATGAGGCAGACGGCCCCGAGAACGCTAAGATCACCCTCAGCTTCCCCCTCAGTGCCGCCCTGCCCGCCGCCCTCACCGTTCACAACCACCGCCCCTCCTCAGCCACATCCTACCCCCGCCGCCGACACTCCTCCTCGGCCTCCAAGGCGTCCAACGAGGTGTCAGCATGGAAACTGGATGCCACCACCACAGACAAACGGCGGCCCTTTAACCCCCCCCAGCGGGACAGCTCCCCGTCctcttcctccgcctcctcttccccttcctcctcttcctctcctatggATCTTACCGCACTGGTCAAAAAGGACATCAAATCCCCCCCACCTCTTTTCAAAGCCGGTCTGGACTCCCAGTTCCACAGGTTCCCCCCCAGGTCTTCCAATGGACCTTTAGGTGGTTACCCAGGGGAGGGTCACAGACTGACCAATGGCACGGCCTCACCCTCAAAGACTGCACAGATCCTGTTCAACCTGAGCACTGTGGCCTATCGGGGCCAGGGGGGGCGGGGCACAGACAGAAAGGAGAAAACAGGGAaaaaaggagggagggtgggCAGCCCCCAAGTTGGAACAAACCTACGTCCACCCAACCTccacctttctcctcctcttcctcacccctcTGAGTCTTTCACtcttcctcctcactcctcctccacccccccagaTGGCCCCGAGCCGGAGCTGATATGTGGGGTGTGCCACCGCCTCTTCAGCTCCGCCTTGTCTCTCACGGCCCACATGCGGCTGCACCGTGGCGGCCGGGCCCTCAGCTGCCAGCACTGTGGCAAAGCATTCATCCACAACAAGAGACTGCAGTCCCACGAGGCCTCCTGCACGCACGCTCTGAACCCGGCCCTCCCATCTAgcatcccccttctccccatcctGGCCAAAGAGGAGCCCCTGGAGGAAGGGGAGGTTAGGGTGGAGGGAGGACAGATTGTGGGGGCAAGTGAAGAGGATATGAAGCCTGGGAAAGGGAAAAAAGGGCGAGGTCTCCTGGTTCGGCATGAAGGCGACGTGTCAGAGCTGGTGGGGGACGAGGACCACTTCGTCAAGGTGGTGGACGGCCATGTCATCTACTTCTGCTCGGTGTGCGAGCGCTCCTACATGACCCTGTCCAGCCTCAAGCGTCACTCCAACGTGCACTCGTGGCGCCGCAAGTATCCCTGCCACTTCTGTGACAAGGTGTTCGCCTTGGCCGAGTACCGCACCAAGCACGAGGTGTGGCACACGGGCGAGCGACGCTACCAGTGCATCTTCTGCTGGGAGGCCTTCGCAACGTACTACAACCTGAAGACCCACCAGAAGGCTTTCCACGGCATCAGCCCGGGCCTCATCTCCAGCGAAAAGACAGTCAACGGCGGTTACAAGCAGAAGGTCAACGCCCTCAAGTTCTACCGCCTGCTTCCTATGCGTTCCCAGAAGAGACCCTACAAGACCTACAGTGACTCCCTGGCCAACAGCCTGCTGCTGCCCCCGTCTGACCCCCCTGCCGTCCCCTTGCCTCAGCCCCTGGACTGCAGCCTGCCCGGCTCCCTGGACCTTCACAGCCTCATCAGTTGCTCTCTACCCAAGGGTGTGAAGCCTGACCCTGACAAGTTCCCTGCTGGCTTCCCCCTCTCAGTGGGCCTAGAGCAGGGAGAGATCCCCACACTGCCCCCCTCCCTAACAGGTATGGCCTTAGGGAGAGtagctgacagagagacagagtcagagcagGTAGATAGCTGTGGCAGCAGCTCCAAGGCATCCGTTCGTAACAAAGTCAAAACTCCAAAGGTCAGCGGTAACCCAGAGTTGGGTTTGTCTTCTGTCATCACGTACGGCCACTCCAAGCCCTCCGTCATAGTGCATGGCACAGCGGCGCCATCCGTCATTGTCCATAGCAACCAGGTCACCTCTGGGGCCGGGAAAGGCCCCCTGAGCAGTCCCTCCCCTGAAGCTAGCAACAGCCAGACACTCCCCAAGGTCAGTGCCAAGCCTGTTAAAATTCACAGGGAAAGTACAGAGAGCCATAGGAAGAGAGCTAAATTAGTGGATAGTTCAGATgccacagaggagggggagaggagatcaGAAACAGGTCGGTCCCATCATAAGTCCCGCAAGGGGCACAGCAAGAGTGACAGCTCCTCAGCCAAACAGTCGTCCACAGGGTCAGAGGGCAAAGGGGCCGGGCCGCTGTGCCAGATCACGGTGCGGATAGGCGAGGAGGCCATGGTCAAACGCAGCATCTCCGAGACGGACCTCAAGAGGGACAGGAGCCCCCCTCCTTCCAGAGCCAAAAGGATGGACTCCTCCCCACATGACTCCAAGGAACCTCGccactcccaccaccaccaccacaaacaccGCTCCCATCGCAGCTCTAGTGTCGAagctgagggggagagaggaggagatggggtgagagaaaaTGGAGAGGGGGACAGCCGGAAGAAAAGCCCAAAAGCCACGGGCAAGGTCAGAGAGTACTACTTCCGCCAGGAGGTGCGCAAGCAGGGGCAGAGTGAGGATGATGAGGACAACCTCTGGAGGCCCTACTACTCATACAAGCCCAAGAGGAAGGCCCCTCATGCCCACAAAACAAAGAACTGGCAACGCAAACTCCACTACAAACGCTCCCTCCGGCTAATGAGGAGGGCAGAGAGACTCATGGACCATGTGAATAAGGAAGACCAAGAGAAGGAGGATGGAAAGATGGATGAGGTGGAGCAGGAAGTGGGGGAGGTGAAAGATCACATGgtgcaggaggagggagaggcacCTGAATCGTTCAGTACTTCCTCTATACCTTCAAAAGAGAAGGacaaagagggggaggaagaaatCGGGGAAGCCCACCTTAAGCTCGCTGATCCTCCCCTGGTCTCTCCCCAGCCCCCATTGTCTACCTCAGTCCCCCTTATGGACACAAAACGCCGGCCCTGGTCCGATGGAAGTGCGTCGGAGTGCGATACGTGTGGCCGCTGGTTCTCCAGTTCCAGGAAGCGGGATAAACACGAGCTTAGCCACCTGCTAGAGTTTGTGTGCCTCCTCTGTAGGGCCCCCTTCCCTTCCAGGGACCAACTAGAGGACCACCAGAGAGCCCAGCACCCCAAAGCCCCCAACCCCTCGTCTGTGCCATCCCGAGCGGGGTGTCAGTCACGAGATGAGGGCATGGAGACAGAGACGGAGTTAACAGAGGTagacagggcgagagagagggctaTACTAGGGAAGGGAAGTCCAAGTTGCCTAAGCAGAAGGTCATTGGCGAGACACACCTGTCCGCAGTGCCATAAGGTGTGCAAGACATCCTCAGCGCTAAACCGCCACGTGAGGCGCCACGAGTTAAGCAGCTCCccggagagagaaaaggaggagacgCAGACAGAGTCaaaaacagcagcagcagcagagacaacAGTTAGCACTGTTAGCAAAGACGTAGACACCACGAGTGACCATGTTCCCATTGTTCACTCTGTCCCCGTTATCAGCTACCCTATCCCAGAGACACAGCATAGTAGCGAGGCCATAGAGCCGCTGCAGTGCGCAAGCCAGCCTAGCGAGGTGAAAGCAGAGCACCAAACTCCAACACTGTGCAGCGGCCCTGAACTCAAAGAACTTAATGAACTCACAACTCCCATTCCTGACAGAGAGCCCAGTCCTCAGATTATTCAGCCCCCTCCAGAGATCCCCACAGCCGACCGGCCGacaccatctccctccctctgctactCCTCGGCACTCCAGGGTGTGCTGGTCATGAGCAGCGGAGCTGAATGTCTGGACTACCGGACCCCCAGGAAGAGGAGTCTGGAGGGGCAGAACCACAGGAGGACCAGCCCTGCACCTGTCACTTCTCCAAATATGGCCCCGACCTTGCAGATGAGAATCAGCCATACTGCTGCTCCTCTGTCCGTTGCCATGACAACAGTGCCCCTCCAAGGGGTCTGTGGTGTGAAGCAGGAGGGTGATATTGTGGggaaaggacagagggagggatgtgGGATGGGCCTCCTCCATCATGCTGGTTTTAAGAACTCACCAGTGGCCCAAGATCTCAGGGTCCCACCCTTGTCCAGGAGCCCCAGTCCCAACCAAGCACAAGACCTGACCATGTCCTCGATTCTAgccagggagagggaggtggagagggaaaggcagagagaatgggagagggagatgaagagagagctgGAAAGGGAACAGgatatggagagagagttggaaagggggaggcagagggaaAGGGATATGGACAGAGAGCTAGAAAGgaggaagcagagggagagggagatggacagagagctaggaaggaggaagcagagggagagggagatggacagagagctgggaagggagaggcagagagaaagggagatggagagggctcAGCAGTCAAGGGGAGCATCACTACAGGAGCAGCCCAGAGACATGGAGGGGACCCTCCTGGTACCCAAAGAGGAGCCGATTAGTCCCGCACCGTCCCCGATACACACACCAATTCAAACTGCTATTAACAGCCCACCCTTGCAGAGGCGGCCCTCCAAGTTTCCCAGCCACTTCCCCACTGCTATGGACCTGCTGATGCAGGCCAACCAACAGGTTGCCCAGTCCCTGCGTGGCACACAGGGTCTCCAGAGGTTTCAGTTGCCCCCTGGGTCGGTCAGTGGCAGCGACCGCCCTTCTGCCCATGCCCTGTTGCTCCCCCGGGACCCCCCACCGTCCGAGGAAGAGCCCCTGGACCACTCCCCAACGCCATCGAGAGACCCTCACAGAGGGGAGGTCACTGCCAGGGGATACCCCATGCAGGACTACCCGCTGCCCCTCATCGTCCAGGGTGGCTACCGCTCTGGCAAGAAGCAGGAGGACAACCTGCTCATGTCCTACCCGACGGGGCCTCTCGCCTTCGGGCCGCTGGGGAAGATGGTGCCTACCGGGGATCTTGCCAAACTGCCGTTCTACCCCGACCCCTACCACCTGCTTTACGGGCCGCAGCTGCTGGCCTACCCCTACAACCTGGCCACCCTGCCCATGGCTCTGAACATGATGGCCCCCGGGGGGGAGAAGGTGGAGCCGTTGCCCTTCCTCCCTGCCCTCTTCAACTACGCTGCTGCAGCTGGTCCCTACGCTGGCATGGCGCCACACCACCTAGTGGGGAACCCCAGCCTCTACAACAGCAGTGGCGGCAGCAGCAAGAAACAGCGGGACAACAGCAACGGAAAGTTGTAGAAGGTGTATATAGAAATGACATCTGAGGAATATTTCAAAGCGGACGACCAGTCCCTGTAGTGGAGAAGGAAGGGTGCCATCGGCTCCTTTGTAGTGCGTACACTTGCACAGTCCCCTGCCTCTCTTTTGTAAAGTAGCGATCAGAGCCAAAGCGTTGAATCAGGAGGAGGGATGATGGGAAGTGGGGGAGTGaagtaagaggaggagagaaaaaagaCAGATCCAtcattcccctctcctttcctctggcTCGCCCCATTCACCTCTGGTTTCTGTTCTCACGTCTTTCAGTAGTAATAGTTCTAGAGCTTGATTAATTGTCCTCTCAAACTTGTTACGACAATATCTATAATATAAGAATAACAACAGCTAACAGGGTGTGTTTTGCGAATCATTTGTTTCGGTCCGCTTCCCATTCTGTTGACCGCATATAAATACAGGGGAGGCCTTGTTTTAGGGACAGAAGGGATCAGCCAAAATGGACATAATTCGACATGGTGGGAGTCGGAGCATTAAAttacactgtgtgagtgtgtgatatgTGTGATTGCTTTAGTAAACTTGTGCTCCAAGTGTCTGTGAGAGCTTTATATGAACAGGTAACATGCACAGTATGTAGGAATTCTGTTTGTGAACGCTGAGGTGGGATTCTGCTTGTTTGGCGTGGATGTGTGTGAGTGGCTGTATGGCTGCCATCTGAGTGCTGATCGTTCCATGGGGTTCTGAGGCGTTAGCAACATTCTAACACTAGATGGACTAGGCATTATAGGTCAGTGCATAGAAGCATTAGAAGGAATTCCTCTATTTCCCGTTCACAAAGCAGCAACTCTAGCGAACCTTTTGCCTGGAGTAGAATCTGTATTTGTGTCAATTGCCGATCTTGTGAGCTTATGTTACCTCCAGTAACCATAGTGGCCAGATGACTTTCAGTCCAGGTCACTAACCTAAGACCATAGTGGCCAGATGACTTTCAGTCCGGGTCACTAACCTAAGACCATAGTGGCCAGATGACTTTCAGTCCGGGTCACTAACCTAAGACCATAGTGGCCAGATGACTTTCAGTCCGGGTCACTAACCTAAGACCATAGTGGCCAGATGACTTTCAGTCCGGGTCACTAACCTAAGACCATAGAGTGGCCAGATGACTTTCAGTCCAGGTCTGCTTCGAGGTTCATGTTAGTTTTTACCTTGTGCATAACAACTGGAAAACATTCCTAGAAAAAGGGAGGGAAGACTTGACACTTGTAGCTGTTATGCACATGTACTGTAGCTGGCCACTGGGTGACAATCATAGGCTAGTGTAGACCATACACTTCCAGTTGTCCTTGTACTCATCTCATTTTTTCCAAGGattgaaaataataaaacaagAATCAGTCAACCTTTTTATTCTTGTGGCCTTTTCCCTCCCCCTGATGCCCCCTGGTGTCCACCAAAGACCCACTCCATTTGCTAGGCCGTGTTGAAGAGAGGGAGTGTACAAGGAAATACATAGAGATGGAATCAGGGCAGGGCAATTTCTGTGATCCTAAGAGAGAGATTAAAAGAGAAACACAGAGGCCAGGGCGCACCTAGGCCAGTACCCTCAACGGCGCTTCCTACATCTTGATGTCGAATCAAAAAGACCCCTCCCCCTCCACTGAAAGGAGATAGAAAAGGACAAGGCGAATGGAGTCGGAAGACGCAGTAAGATCACGCCACACTGAGGTCTGCTTGTCTCAGACAGCTTTTTGTGTTCCAAtagctcctctcctccctccctccttctgcgCTCTGGGGTAGAGAAGCGAGAGGTGACGTAATCGTCTCCCACAGAGCTGGTGTTGAAGGGCCGGGCTTAGCAGCATCCACTGTGCCGCTCTGAGTTTCCCAGAATCCTGTGGGTCTTTTTCCTGTCCTGAGTCTTTCTCTGTGTGATTTATGTGTTACACTAcatttttggatttgtttaactttttctACCCCCTTTAGCTAGCGAGACAAAAGTGGATTCAGCAAAAGGGGGTTTGAGTACACTTATAAATATGAATGTAATTTTAGTCAAGAGGTTATTGAAGTACAAAATGCATTAAAGGTAGATGGATTTCAGTTTTTCTGACTTGAAAAATAACATGTGTAAAGAGTCGTTATGAAGTCTGGTAtgcatatatactgtacagtcCTAGGAACGTCAAGAAACTTGGGTTCTGTAT

Function

NR:

description
zinc finger and BTB domain-containing protein 38-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021578185.2 True 8204 mRNA 0.56 2 51316814 51332192

Neighbor

gene id symbol gene type direction distance location
LOC110500685 NA coding upstream 15618 51298879 ~ 51301196 (+)
LOC110500679 LOC106608674 coding upstream 85994 51217984 ~ 51230820 (+)
LOC110500680 LOC106608673 coding upstream 99885 51202043 ~ 51216929 (+)
LOC110500677 LOC106608671 coding upstream 142627 51169316 ~ 51174187 (+)
LOC110500675 LOC106608669 coding upstream 163044 51145280 ~ 51153770 (+)
LOC110500687 LOC106608680 coding downstream 19121 51350884 ~ 51361534 (+)
LOC110500885 LOC106608683 coding downstream 38529 51370721 ~ 51413247 (+)
LOC110500691 LOC106608684 coding downstream 125036 51457228 ~ 51485888 (+)
LOC110500694 LOC106608686 coding downstream 169406 51501598 ~ 51507145 (+)
LOC110500695 LOC106608687 coding downstream 177091 51509283 ~ 51554830 (+)
G1749634 NA non-coding upstream 2002 51314321 ~ 51314812 (+)
G1749628 NA non-coding upstream 7166 51306141 ~ 51309648 (+)
G1749627 NA non-coding upstream 10780 51305813 ~ 51306034 (+)
G1749626 NA non-coding upstream 11197 51305359 ~ 51305617 (+)
G1749640 NA non-coding downstream 5476 51337668 ~ 51338090 (+)
G1749641 NA non-coding downstream 6151 51338343 ~ 51338700 (+)
G1749642 NA non-coding downstream 7326 51339518 ~ 51339907 (+)
G1749644 NA non-coding downstream 9175 51341367 ~ 51341593 (+)
G1749646 NA non-coding downstream 10294 51342486 ~ 51343013 (+)
gbrap gbrap other upstream 174806 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 183476 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 713537 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1707234 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1870188 49445839 ~ 49446626 (+)
G1749651 NA other downstream 30494 51362686 ~ 51363380 (+)
G1749650 NA other downstream 86777 51418969 ~ 51450475 (+)
G1750012 NA other downstream 739408 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 762517 52094709 ~ 52095105 (+)
G1750050 NA other downstream 859008 52191200 ~ 52197007 (+)

Expression


Co-expression Network