LOC110500719 (LOC106608586)


Basic Information

Item Value
gene id LOC110500719
gene name LOC106608586
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 53215229 ~ 53245179 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958166.1
CGTGTCTCGTCAATGTGTTAATCTGCATACTCAATGCTCAACATGTCATCAGATGATCTGccttcagtattactttagttaTAGCTATTGGGTTATAAACCATGTTGGTTACATTTTTGCTATTTTATTAACTTAATCAGTGGTTCTTTGTTTAATGGTGATAGTTGGAGCAACTATTATGAATTGTGTGTTGCCGGAGTTTTCCGATTCTAAACGACGTTATTTTCCGAAGATGACGTTTTCGAACGGGAggggggacagtgtgtgtgtggtgtgtgtgtgtgtgaactgagcagaggtgaagaagaggaggatgaagctGGGAAcggaggatgggaggaagagtGGAATAAGCGACAGGCTAGCTATCAAGGGCTGTGTATGCATGCCTGCAAGTGTGAATGCGTgagtgaggaagagggaggtggttATCGGACTGAAACAAAGACGCATTTTGGAACCCCGAAACATTAACGGAAACTTTAAACTTTTACCAGCCAGAGCTTGGCAACTGTGCCGGGTCCCGGCTTTGTTTCGAGGCAGGGGAGGTTTACAATAAATGTAGGGATAAAATAGCCCCAGATCGAATTTTTTTTACGCAAGAGGGGAATCCCTTGGATAGTGTTTGTTGGGGGTAACGAGAGAATGGCGGCCAACATGTACCGAGTGGGAGATTACGTGTACTTTGAGAATTCCTCCAGCAACCCTTACCTGATCCGCAGAATAGAAGAGCTCAACAAGACGGCCAATGGGAACGTGGAAGCCAAGGTGGTGTGTCTGTTTCGGAGGAGGGACATCTCGGGCAACCTCAACACTCTGGCCGACAGCAACGCAAGAGACTTTGAGGAGGAGTCCAAGCAGCCCACAGTGTCTGAACAGCAGAAACACCAGCTGAAACACAGAGAACTCTTCCTCTCTCGGCAGTTTGAGTCTTTACCAGCCACTCACATAAGggggAAATGTAACGTTACACTCCTCAACGAAACAGACGTCCTCGCCGGCTACCTGGAGAAAGAGGAGTGTTTCTTCTACTCGCTGGTGTTTGACCCGGTCCAGAAGACCCTGCTGGCGGACCAAGGAGAGATTCGGGTGGGCTCCAAGTACCAGGCCGAGATCCCCGACAAGTTAGCCGaagGTGAAGAAGACACCCGTATTCAAGAGAAGCTGGAGGTCAAGGTGTGGCACCCCGACAACCAGCTCAAAGACCCACAGATTGACCAGTTTCTGGTGGTGGCTCGTGCTGTGGGGACGTTTGCCCGAGCCCTGGACTGCAGCAGCTCTATCCGTCAACCCAGCCTGCATATGAGTGCTGCGGCCGCCTCCCGAGACATCACGCTGTTCCATGCGATGGATACCCTGCAGAAGAACgactacgacctggccaaggccaTGTCCACGCTGGTGCCTCAGGGCGGGCCCGTGCTCTGCCGTGACGAGATGGAGGAGTGGAGCGCCTCGGAGGCCATGCTGTTCGAAGAGGCCCTGGAGAAATATGGCAAGGACTTCAACGACATCCGCCAGGACTTTTTACCATGGAAGTCACTAGCCAGCGTGGTTCAGTTCTACTACATGTGGAAAACCACCGACCGCTACATTCAACAGAAACGACTCAAGGCAGCGGAAGCAGACAGCAAGCTGAAGCAGGTTTACATCCCCACCTAcaCCAAGCCCAACCCCAACCAGATCATGGCTCCTGGTAACAAGCCTGGCATGAACGGGGCCGCTGGCTTCCAGAAAGGACTGAGCTGTGAGAGCTGCCGTAACCTCCCCTCTGTTGCAGCCGCCCAGTCAGCACAGTGGTACGCGTGGGGTCCTCCCAACATGCAGTGCAGACTGTGTGCATCCTGCTGGATCTACTGGAAGAAGTACGGAGGCCTGAAGACCCCCACACAGCTAGAGGGGGCCGCAAGATCTGGCTCAGCCCCTCAGGAGTCAACCCCCCGAGGTCACATGACCCGCCAGGAAGTGCAGGGCCTGTCACCCTTCACGACTAGTGGGGGGCGGGCCAAGCTGCTGGCCAAAAACCGGCAGACGTTCATCCTGCAGACCACCAAGCTGACGCGCATCGCCCGCCGTGTCTGCACTGACATCCTGCAGCCCCGCAGCGCCGCACGCCGCCCCTATGCCTCCATCAACGCCAATGCCGTCAAGGCCGAGTGTATGATAAGGCTGCCTAAAGCAACCAAGGCCCCTATAAAGAACTGCTCGATCCCTCGACCACCGCTGGCCACCATAGTGAAGGAACTGGcCATCCAGGCTCCACTCAAGCTGAAGGCCCCCAGAGgcacccccacccccatcaaccgCAACCAGGCCAACCAGCCCCGGGGGGGATCGGCCCTGCTTGGCAAGAGGCCCTTTGACAGCAGCGCGTTGGCACTGCCGTTCCCCACCAATGGGAGGCCGTTCACATCAGGCATGAGGACCACCTCTCAGTCAGTGATCAAGCGTCAGAAAGTGAACCAAGGAGACGCGCCAAACCCTGTGGTTTTTGTTGCTACTAAATACACCAGGGCTCTGAGGAAACACCTGACCCAGTCTGAGATGCGACGGGCAGCCAGGAAACCACACCTTCCCGTCAGGGTCAAGCTGCCCCTGCCTCCCCGGCCCCTGGCTTTAGCCATTCTGCCCTCCAGCACCAGCGAGCCCATCGTCCTGGAGGactaacccccccccaccccaccccactgcGAAACAGTTAGGGCGCACCCAGCGCACCAACCTGCTAGTGTAGCAGCACAACCCCATACCAGTAGTTGTTTTCTCTCGTCGTATTTTTTAAATCTCGTCTTCTGTTCTGTTACCTCCCAAAAGCTGACGtgctgctccacacacacacacacacacacacacacacacacacacacacacacacgagtgacACCCGCATGTATGCATTATATCTAGTACATGGCATcaattctttacacacacactacgcatacactgagtgtacaaaacattaggaacacccccTTAAGCCCTCAGGAACGCCtcaaacccagcagcgttgcagttctcgacccactcaaaccagtgcacctggcacctactacaatacactgttcaaaggcacttaaatattttgttttgcccattcatcctctgaatggcacacataca
>XM_036958167.1
GTGTCTCGTCAATGTGTTAATCTGCATACTCAATGCTCAACATGTCATCAGATGATCTGccttcagtattactttagttaTAGCTATTGGGTTATAAACCATGTTGGTTACATTTTTGCTATTTTATTAACTTAATCAGTGGTTCTTTGTTTAATGGTGATAGTTGGAGCAACTATTATGAATTGTGTGTTGCCGGAGTTTTCCGATTCTAAACGACGTTATTTTCCGAAGATGACGTTTTCGAACGGGAggggggacagtgtgtgtgtggtgtgtgtgtgtgtgaactgagcagaggtgaagaagaggaggatgaagctGGGAAcggaggatgggaggaagagtGGAATAAGCGACAGGCTAGCTATCAAGGGCTGTGTATGCATGCCTGCAAGTGTGAATGCGTgagtgaggaagagggaggtggttATCGGACTGAAACAAAGACGCATTTTGGAACCCCGAAACATTAACGGAAACTTTAAACTTTTACCAGCCAGAGCTTGGCAACTGTGCCGGGTCCCGGCTTTGTTTCGAGGCAGGGGAGGTTTACAATAAATGTAGGGATAAAATAGCCCCAGATCGAATTTTTTTTACGCAAGAGGGGAATCCCTTGGATAGTGTTTGTTGGGGGTAACGAGAGAATGGCGGCCAACATGTACCGAGTGGGAGATTACGTGTACTTTGAGAATTCCTCCAGCAACCCTTACCTGATCCGCAGAATAGAAGAGCTCAACAAGACGGCCAATGGGAACGTGGAAGCCAAGGTGGTGTGTCTGTTTCGGAGGAGGGACATCTCGGGCAACCTCAACACTCTGGCCGACAGCAACGCAAGAGACTTTGAGGAGGAGTCCAAGCAGCCCACAGTGTCTGAACAGCAGAAACACCAGCTGAAACACAGAGAACTCTTCCTCTCTCGGCAGTTTGAGTCTTTACCAGCCACTCACATAAGggggAAATGTAACGTTACACTCCTCAACGAAACAGACGTCCTCGCCGGCTACCTGGAGAAAGAGGAGTGTTTCTTCTACTCGCTGGTGTTTGACCCGGTCCAGAAGACCCTGCTGGCGGACCAAGGAGAGATTCGGGTGGGCTCCAAGTACCAGGCCGAGATCCCCGACAAGTTAGCCGaagGTGAAGAAGACACCCGTATTCAAGAGAAGCTGGAGGTCAAGGTGTGGCACCCCGACAACCAGCTCAAAGACCCACAGATTGACCAGTTTCTGGTGGTGGCTCGTGCTGTGGGGACGTTTGCCCGAGCCCTGGACTGCAGCAGCTCTATCCGTCAACCCAGCCTGCATATGAGTGCTGCGGCCGCCTCCCGAGACATCACGCTGTTCCATGCGATGGATACCCTGCAGAAGAACgactacgacctggccaaggccaTGTCCACGCTGGTGCCTCAGGGCGGGCCCGTGCTCTGCCGTGACGAGATGGAGGAGTGGAGCGCCTCGGAGGCCATGCTGTTCGAAGAGGCCCTGGAGAAATATGGCAAGGACTTCAACGACATCCGCCAGGACTTTTTACCATGGAAGTCACTAGCCAGCGTGGTTCAGTTCTACTACATGTGGAAAACCACCGACCGCTACATTCAACAGAAACGACTCAAGGCAGCGGAAGCAGACAGCAAGCTGAAGCAGGTTTACATCCCCACCTAcaCCAAGCCCAACCCCAACCAGATCATGGCTCCTGGTAACAAGCCTGGCATGAACGGGGCCGCTGGCTTCCAGAAAGGACTGAGCTGTGAGAGCTGCCGTACCGCCCAGTCAGCACAGTGGTACGCGTGGGGTCCTCCCAACATGCAGTGCAGACTGTGTGCATCCTGCTGGATCTACTGGAAGAAGTACGGAGGCCTGAAGACCCCCACACAGCTAGAGGGGGCCGCAAGATCTGGCTCAGCCCCTCAGGAGTCAACCCCCCGAGGTCACATGACCCGCCAGGAAGTGCAGGGCCTGTCACCCTTCACGACTAGTGGGGGGCGGGCCAAGCTGCTGGCCAAAAACCGGCAGACGTTCATCCTGCAGACCACCAAGCTGACGCGCATCGCCCGCCGTGTCTGCACTGACATCCTGCAGCCCCGCAGCGCCGCACGCCGCCCCTATGCCTCCATCAACGCCAATGCCGTCAAGGCCGAGTGTATGATAAGGCTGCCTAAAGCAACCAAGGCCCCTATAAAGAACTGCTCGATCCCTCGACCACCGCTGGCCACCATAGTGAAGGAACTGGcCATCCAGGCTCCACTCAAGCTGAAGGCCCCCAGAGgcacccccacccccatcaaccgCAACCAGGCCAACCAGCCCCGGGGGGGATCGGCCCTGCTTGGCAAGAGGCCCTTTGACAGCAGCGCGTTGGCACTGCCGTTCCCCACCAATGGGAGGCCGTTCACATCAGGCATGAGGACCACCTCTCAGTCAGTGATCAAGCGTCAGAAAGTGAACCAAGGAGACGCGCCAAACCCTGTGGTTTTTGTTGCTACTAAATACACCAGGGCTCTGAGGAAACACCTGACCCAGTCTGAGATGCGACGGGCAGCCAGGAAACCACACCTTCCCGTCAGGGTCAAGCTGCCCCTGCCTCCCCGGCCCCTGGCTTTAGCCATTCTGCCCTCCAGCACCAGCGAGCCCATCGTCCTGGAGGactaacccccccccaccccaccccactgcGAAACAGTTAGGGCGCACCCAGCGCACCAACCTGCTAGTGTAGCAGCACAACCCCATACCAGTAGTTGTTTTCTCTCGTCGTATTTTTTAAATCTCGTCTTCTGTTCTGTTACCTCCCAAAAGCTGACGtgctgctccacacacacacacacacacacacacacacacacacacacacacacacgagtgacACCCGCATGTATGCATTATATCTAGTACATGGCATcaattctttacacacacactacgcatacactgagtgtacaaaacattaggaacacccccTTAAGCCCTCAGGAACGCCtcaaacccagcagcgttgcagttctcgacccactcaaaccagtgcacctggcacctactacaatacactgttcaaaggcacttaaatattttgttttgcccattcatcctctgaatggcacacataca
>XM_021578243.2
TGTCTCGTCAATGTGTTAATCTGCATACTCAATGCTCAACATGTCATCAGATGATCTGccttcagtattactttagttaTAGCTATTGGGTTATAAACCATGTTGGTTACATTTTTGCTATTTTATTAACTTAATCAGTGGTTCTTTGTTTAATGGTGATAGTTGGAGCAACTATTATGAATTGTGTGTTGCCGGAGTTTTCCGATTCTAAACGACGTTATTTTCCGAAGATGACGTTTTCGAACGGGAggggggacagtgtgtgtgtggtgtgtgtgtgtgtgaactgagcagaggtgaagaagaggaggatgaagctGGGAAcggaggatgggaggaagagtGGAATAAGCGACAGGCTAGCTATCAAGGGCTGTGTATGCATGCCTGCAAGTGTGAATGCGTgagtgaggaagagggaggtggttATCGGACTGAAACAAAGACGCATTTTGGAACCCCGAAACATTAACGGAAACTTTAAACTTTTACCAGCCAGAGCTTGGCAACTGTGCCGGGTCCCGGCTTTGTTTCGAGGCAGGGGAGGTTTACAATAAATGTAGGGATAAAATAGCCCCAGATCGAATTTTTTTTACGCAAGAGGGGAATCCCTTGGATAGTGTTTGTTGGGGGTAACGAGAGAATGGCGGCCAACATGTACCGAGTGGGAGATTACGTGTACTTTGAGAATTCCTCCAGCAACCCTTACCTGATCCGCAGAATAGAAGAGCTCAACAAGACGGCCAATGGGAACGTGGAAGCCAAGGTGGTGTGTCTGTTTCGGAGGAGGGACATCTCGGGCAACCTCAACACTCTGGCCGACAGCAACGCAAGAGACTTTGAGGAGGAGTCCAAGCAGCCCACAGTGTCTGAACAGCAGAAACACCAGCTGAAACACAGAGAACTCTTCCTCTCTCGGCAGTTTGAGTCTTTACCAGCCACTCACATAAGggggAAATGTAACGTTACACTCCTCAACGAAACAGACGTCCTCGCCGGCTACCTGGAGAAAGAGGAGTGTTTCTTCTACTCGCTGGTGTTTGACCCGGTCCAGAAGACCCTGCTGGCGGACCAAGGAGAGATTCGGGTGGGCTCCAAGTACCAGGCCGAGATCCCCGACAAGTTAGCCGaagGTGAAGAAGACACCCGTATTCAAGAGAAGCTGGAGGTCAAGGTGTGGCACCCCGACAACCAGCTCAAAGACCCACAGATTGACCAGTTTCTGGTGGTGGCTCGTGCTGTGGGGACGTTTGCCCGAGCCCTGGACTGCAGCAGCTCTATCCGTCAACCCAGCCTGCATATGAGTGCTGCGGCCGCCTCCCGAGACATCACGCTGTTCCATGCGATGGATACCCTGCAGAAGAACgactacgacctggccaaggccaTGTCCACGCTGGTGCCTCAGGGCGGGCCCGTGCTCTGCCGTGACGAGATGGAGGAGTGGAGCGCCTCGGAGGCCATGCTGTTCGAAGAGGCCCTGGAGAAATATGGCAAGGACTTCAACGACATCCGCCAGGACTTTTTACCATGGAAGTCACTAGCCAGCGTGGTTCAGTTCTACTACATGTGGAAAACCACCGACCGCTACATTCAACAGAAACGACTCAAGGCAGCGGAAGCAGACAGCAAGCTGAAGCAGGTTTACATCCCCACCTAcaCCAAGCCCAACCCCAACCAGATCATGGCTCCTGGTAACAAGCCTGGCATGAACGGGGCCGCTGGCTTCCAGAAAGGACTGAGCTGTGAGAGCTGCCGTAACCTCCCCTCTGTTGCAGCCGCCCAGTCAGCACAGTGGTACGCGTGGGGTCCTCCCAACATGCAGTGCAGACTGTGTGCATCCTGCTGGATCTACTGGAAGAAGTACGGAGGCCTGAAGACCCCCACACAGCTAGAGGGGGCCGCAAGATCTGGCTCAGAGTCAACCCCCCGAGGTCACATGACCCGCCAGGAAGTGCAGGGCCTGTCACCCTTCACGACTAGTGGGGGGCGGGCCAAGCTGCTGGCCAAAAACCGGCAGACGTTCATCCTGCAGACCACCAAGCTGACGCGCATCGCCCGCCGTGTCTGCACTGACATCCTGCAGCCCCGCAGCGCCGCACGCCGCCCCTATGCCTCCATCAACGCCAATGCCGTCAAGGCCGAGTGTATGATAAGGCTGCCTAAAGCAACCAAGGCCCCTATAAAGAACTGCTCGATCCCTCGACCACCGCTGGCCACCATAGTGAAGGAACTGGcCATCCAGGCTCCACTCAAGCTGAAGGCCCCCAGAGgcacccccacccccatcaaccgCAACCAGGCCAACCAGCCCCGGGGGGGATCGGCCCTGCTTGGCAAGAGGCCCTTTGACAGCAGCGCGTTGGCACTGCCGTTCCCCACCAATGGGAGGCCGTTCACATCAGGCATGAGGACCACCTCTCAGTCAGTGATCAAGCGTCAGAAAGTGAACCAAGGAGACGCGCCAAACCCTGTGGTTTTTGTTGCTACTAAATACACCAGGGCTCTGAGGAAACACCTGACCCAGTCTGAGATGCGACGGGCAGCCAGGAAACCACACCTTCCCGTCAGGGTCAAGCTGCCCCTGCCTCCCCGGCCCCTGGCTTTAGCCATTCTGCCCTCCAGCACCAGCGAGCCCATCGTCCTGGAGGactaacccccccccaccccaccccactgcGAAACAGTTAGGGCGCACCCAGCGCACCAACCTGCTAGTGTAGCAGCACAACCCCATACCAGTAGTTGTTTTCTCTCGTCGTATTTTTTAAATCTCGTCTTCTGTTCTGTTACCTCCCAAAAGCTGACGtgctgctccacacacacacacacacacacacacacacacacacacacacacacacgagtgacACCCGCATGTATGCATTATATCTAGTACATGGCATcaattctttacacacacactacgcatacactgagtgtacaaaacattaggaacacccccTTAAGCCCTCAGGAACGCCtcaaacccagcagcgttgcagttctcgacccactcaaaccagtgcacctggcacctactacaatacactgttcaaaggcacttaaatattttgttttgcccattcatcctctgaatggcacacataca
>XM_021578244.2
TCTCGTCAATGTGTTAATCTGCATACTCAATGCTCAACATGTCATCAGATGATCTGccttcagtattactttagttaTAGCTATTGGGTTATAAACCATGTTGGTTACATTTTTGCTATTTTATTAACTTAATCAGTGGTTCTTTGTTTAATGGTGATAGTTGGAGCAACTATTATGAATTGTGTGTTGCCGGAGTTTTCCGATTCTAAACGACGTTATTTTCCGAAGATGACGTTTTCGAACGGGAggggggacagtgtgtgtgtggtgtgtgtgtgtgtgaactgagcagaggtgaagaagaggaggatgaagctGGGAAcggaggatgggaggaagagtGGAATAAGCGACAGGCTAGCTATCAAGGGCTGTGTATGCATGCCTGCAAGTGTGAATGCGTgagtgaggaagagggaggtggttATCGGACTGAAACAAAGACGCATTTTGGAACCCCGAAACATTAACGGAAACTTTAAACTTTTACCAGCCAGAGCTTGGCAACTGTGCCGGGTCCCGGCTTTGTTTCGAGGCAGGGGAGGTTTACAATAAATGTAGGGATAAAATAGCCCCAGATCGAATTTTTTTTACGCAAGAGGGGAATCCCTTGGATAGTGTTTGTTGGGGGTAACGAGAGAATGGCGGCCAACATGTACCGAGTGGGAGATTACGTGTACTTTGAGAATTCCTCCAGCAACCCTTACCTGATCCGCAGAATAGAAGAGCTCAACAAGACGGCCAATGGGAACGTGGAAGCCAAGGTGGTGTGTCTGTTTCGGAGGAGGGACATCTCGGGCAACCTCAACACTCTGGCCGACAGCAACGCAAGAGACTTTGAGGAGGAGTCCAAGCAGCCCACAGTGTCTGAACAGCAGAAACACCAGCTGAAACACAGAGAACTCTTCCTCTCTCGGCAGTTTGAGTCTTTACCAGCCACTCACATAAGggggAAATGTAACGTTACACTCCTCAACGAAACAGACGTCCTCGCCGGCTACCTGGAGAAAGAGGAGTGTTTCTTCTACTCGCTGGTGTTTGACCCGGTCCAGAAGACCCTGCTGGCGGACCAAGGAGAGATTCGGGTGGGCTCCAAGTACCAGGCCGAGATCCCCGACAAGTTAGCCGaagGTGAAGAAGACACCCGTATTCAAGAGAAGCTGGAGGTCAAGGTGTGGCACCCCGACAACCAGCTCAAAGACCCACAGATTGACCAGTTTCTGGTGGTGGCTCGTGCTGTGGGGACGTTTGCCCGAGCCCTGGACTGCAGCAGCTCTATCCGTCAACCCAGCCTGCATATGAGTGCTGCGGCCGCCTCCCGAGACATCACGCTGTTCCATGCGATGGATACCCTGCAGAAGAACgactacgacctggccaaggccaTGTCCACGCTGGTGCCTCAGGGCGGGCCCGTGCTCTGCCGTGACGAGATGGAGGAGTGGAGCGCCTCGGAGGCCATGCTGTTCGAAGAGGCCCTGGAGAAATATGGCAAGGACTTCAACGACATCCGCCAGGACTTTTTACCATGGAAGTCACTAGCCAGCGTGGTTCAGTTCTACTACATGTGGAAAACCACCGACCGCTACATTCAACAGAAACGACTCAAGGCAGCGGAAGCAGACAGCAAGCTGAAGCAGGTTTACATCCCCACCTAcaCCAAGCCCAACCCCAACCAGATCATGGCTCCTGGTAACAAGCCTGGCATGAACGGGGCCGCTGGCTTCCAGAAAGGACTGAGCTGTGAGAGCTGCCGTACCGCCCAGTCAGCACAGTGGTACGCGTGGGGTCCTCCCAACATGCAGTGCAGACTGTGTGCATCCTGCTGGATCTACTGGAAGAAGTACGGAGGCCTGAAGACCCCCACACAGCTAGAGGGGGCCGCAAGATCTGGCTCAGAGTCAACCCCCCGAGGTCACATGACCCGCCAGGAAGTGCAGGGCCTGTCACCCTTCACGACTAGTGGGGGGCGGGCCAAGCTGCTGGCCAAAAACCGGCAGACGTTCATCCTGCAGACCACCAAGCTGACGCGCATCGCCCGCCGTGTCTGCACTGACATCCTGCAGCCCCGCAGCGCCGCACGCCGCCCCTATGCCTCCATCAACGCCAATGCCGTCAAGGCCGAGTGTATGATAAGGCTGCCTAAAGCAACCAAGGCCCCTATAAAGAACTGCTCGATCCCTCGACCACCGCTGGCCACCATAGTGAAGGAACTGGcCATCCAGGCTCCACTCAAGCTGAAGGCCCCCAGAGgcacccccacccccatcaaccgCAACCAGGCCAACCAGCCCCGGGGGGGATCGGCCCTGCTTGGCAAGAGGCCCTTTGACAGCAGCGCGTTGGCACTGCCGTTCCCCACCAATGGGAGGCCGTTCACATCAGGCATGAGGACCACCTCTCAGTCAGTGATCAAGCGTCAGAAAGTGAACCAAGGAGACGCGCCAAACCCTGTGGTTTTTGTTGCTACTAAATACACCAGGGCTCTGAGGAAACACCTGACCCAGTCTGAGATGCGACGGGCAGCCAGGAAACCACACCTTCCCGTCAGGGTCAAGCTGCCCCTGCCTCCCCGGCCCCTGGCTTTAGCCATTCTGCCCTCCAGCACCAGCGAGCCCATCGTCCTGGAGGactaacccccccccaccccaccccactgcGAAACAGTTAGGGCGCACCCAGCGCACCAACCTGCTAGTGTAGCAGCACAACCCCATACCAGTAGTTGTTTTCTCTCGTCGTATTTTTTAAATCTCGTCTTCTGTTCTGTTACCTCCCAAAAGCTGACGtgctgctccacacacacacacacacacacacacacacacacacacacacacacacgagtgacACCCGCATGTATGCATTATATCTAGTACATGGCATcaattctttacacacacactacgcatacactgagtgtacaaaacattaggaacacccccTTAAGCCCTCAGGAACGCCtcaaacccagcagcgttgcagttctcgacccactcaaaccagtgcacctggcacctactacaatacactgttcaaaggcacttaaatattttgttttgcccattcatcctctgaatggcacacataca

Function

NR:

description
metastasis-associated protein MTA2-like isoform X2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003682 chromatin binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K11660 MTA; metastasis-associated protein MTA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958166.1 False 3123 mRNA 0.54 18 53215229 53245179
XM_036958167.1 False 3104 mRNA 0.54 18 53215230 53245179
XM_021578243.2 False 3112 mRNA 0.54 18 53215231 53245179
XM_021578244.2 True 3092 mRNA 0.54 18 53215233 53245179

Neighbor

gene id symbol gene type direction distance location
LOC110500717 LOC106608585 coding upstream 246 53164111 ~ 53214983 (+)
si:dkey-28a3.2 LOC106608587 coding upstream 55937 53148819 ~ 53159292 (+)
LOC110500711 LOC106608589 coding upstream 75793 53105557 ~ 53139436 (+)
LOC110500702 LOC106608597 coding upstream 218594 52989362 ~ 52996635 (+)
LOC110500701 LOC106608599 coding upstream 243913 52969508 ~ 52971316 (+)
cth1 LOC106608603 coding downstream 3495 53248674 ~ 53250658 (+)
LOC110500722 NA coding downstream 6234 53251413 ~ 53256660 (+)
LOC110500887 LOC106608584 coding downstream 23334 53268513 ~ 53330654 (+)
si:ch73-40a2.1 LOC106608602 coding downstream 90737 53335916 ~ 53347700 (+)
rab1ba LOC100695098 coding downstream 103334 53348513 ~ 53367113 (+)
G1751821 NA non-coding upstream 54405 53160568 ~ 53160824 (+)
G1751787 NA non-coding upstream 76769 53092517 ~ 53138460 (+)
G1751792 LOC106608591 non-coding upstream 115818 53098749 ~ 53099411 (+)
G1751766 NA non-coding upstream 152747 53061348 ~ 53062482 (+)
G1751865 NA non-coding downstream 15186 53260365 ~ 53260708 (+)
G1751863 NA non-coding downstream 21106 53266285 ~ 53266800 (+)
G1751883 NA non-coding downstream 42011 53287190 ~ 53287487 (+)
G1751905 NA non-coding downstream 110239 53355418 ~ 53356897 (+)
G1751699 LOC106608599 other upstream 242846 52962449 ~ 52972383 (+)
G1750050 NA other upstream 1018222 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 1120124 52094709 ~ 52095105 (+)
G1750012 NA other upstream 1136227 52071600 ~ 52079002 (+)
G1749650 NA other upstream 1764754 51418969 ~ 51450475 (+)
LOC110500735 ablim2 other downstream 961519 54206483 ~ 54342581 (+)
G1753100 NA other downstream 1756400 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 2345426 55590450 ~ 55592100 (+)
G1755158 NA other downstream 3141228 56386407 ~ 56387622 (+)

Expression


Co-expression Network