si:ch73-40a2.1 (LOC106608602)


Basic Information

Item Value
gene id si:ch73-40a2.1
gene name LOC106608602
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 53335916 ~ 53347700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958173.1
TCTAGCAAGGGGTGAGTGGAGGAGGGAACAAAAAGTAATGGAATAGCCTTCAGGCGTAGCGACATTCTTATGGTCAAACTGAGGATTCCAGGCTGAAAGAATTTCCCGCTATCGCAATATGACCAAAATATTTGACATGTAGCCCAGTTTAGCTATAGACGTCTTACAGACCAAATGCATTGTGAAAAAAAGTGGTTCCTGTTTAAACTTCTTCATAATAGCACTTCGTCATCGCTTGAAGACAGCGTGTTCTGATGTATATTGACAGCACTTGAGAAGACTGGGAAGTGTGCGGACGATGTCGGTCGTCAGGTGGAATGTTGTACTTTGGTTATGTATATACTGTGGCTGCACCTTTGCGCAAACAACCTCCGGAGAAGTGGAGCTCTTCAACTCAGTCAAACAGGCCAGTCTGAAATGGACATCTTATCCAGACCCAAAAGCATGGAGTGAGAAATTACTGAAGATGGGTTCAGAGACCCAAGTCCCAGTCTATCAAGCCTGCGCTGTCAATAACAAACCCAGTTCAAGATCACTACTGACTAATTGGATTGCACGGAAGGATGCCCTGCACCTGCTATTGGACCTACAATTCGCCCAGGAAGAGGAGTCATCATCTAATCAGCTGAGTCCACTCCAGGTCCACCTTCTGGAATCAGACTCTCCACTCACCAAATTTAGTGAATCCCAGAATCCCCTCAATCTAAAAACCTCTCAGACTTTCAGCGCCACAACAGAAGTGCATCAGATCAAGGAGTACCTTAAAAACAGCCTGGAATTAGTGTTAAACACTGAGCCTCTCTCACACAACGGCTTCCATCTTGGATTCACCTACTCAGGGCCCTGCATCTTCCTATCCTCTGTCAGGCTGTACTACAGGAGATGTACTCGTTTGGTCAGCCACCTTGTTGGGTTTGAGGGAGCGTCTGCAGGAGCGGGGCCATTGACAGGGTCCTGTGTTGAAGGCGCCGTGGGGGTAGAGGGGCAAGTGGAGCCCCCTCAGAGGGAGTGCCAGGTGAATGGGGCGTGGGGTCCACTGCAAGGGGGGTGCACCTGCGCCCCGGGTCACCAAGAAAAGGTGGACTCTTGTGAAGCCTGTGGAGTTGGATACTACAAGGCAGCCAATGAGAGTGGGGGTTGTCGCTCGTGTCCACCCAACAGGAAGACGGACAGGGAGGGTGCAGAAGGGTGTGACTGTCGTCAGGGGTACTTCAGCCTCCCGGGTGACCCGTATGTCATGGGGTGCACACGACCACCCTCTGCTCCTGTAAATGTAACAGTCCAGCGCCTCAATGACTCAATACTGACTCTGCTTTGGGACCCTCCCATTGACCTGGGGGGGAGGCAGGAAGTGATGTATGACGTGGAatgctcagagagagagggagggactgaTGGTCAGTGGGCAGTGTGTGGGGAGGCGGTCATCTTTCTTCCTGCCTCAGCGGGACTGACCGTCACTGCAGTCAACCTCACATGGGTCAGCCCATGGTCGGACTACCGGCTGTCGGTCCAGGCAAGAAATTATGTGTCATTCCACCAGGGGGCAGCAGCGTCATCAACAGCATCCATAATCATTCATAGATGGAAATCTCTAGTGATAAACACCCCTGGTTCCATCCCCCTGGATCCCCACCACTCCCATGTGGAAGGTCCCTCTCCCTGGCTGATCATAGGAGCTCTACTGGGAGTCCTACTGCTGTTGATTCTGGTCCCTGCTGCTGTTTATTCTTTGCTACGCAAATACACCAAGCTCAGtcATGACCAGGAGGTGGAGCTGCTGCCTTCTCCCTCAGGTGTGAGCTATGGTCGTAATGAGGGCCCACACGCTGCCCCTCAGGAAGACAACATGGTGTTGGTACCTGGTGTGGTTCAGTTGCTGGAGAGTGTTGGTGACAAACTACTTACCAGTCTGAGGGATGTCCTGGTGGACAGGAACCAGCTGACCCTGGGAAAGGAGCTGGGAGCTGGAGAGTTTGGCTCTGTCTACGAGGGGATCTTTACTCCAGAGGAAGGGATAGACATCAAAGTAGCTGTCAAGACTATGAGAGTTGGACTCGACAGGCAGGAGGACTTAGAGTCGTTTCTGAAGGAAGCAGAGATCATGCAGCACTTTGACCATAAAAACGTTGTCAAACTTCTTGGGGTCACCTTGGAGCAGGATTCTCCTTTGCCAGTCCCTCTGGTGATACTACCCTTCATGAAGCATGGAGACCTGCGCCGGTTCCTCATCGCTACCCGCTACGGGGATATTCccatgTTTGTGCCTCACCAGAGTCTTCTGCGCTTCATGGTTGACATTGCAGCAGGGATGGAGTATCTGAGTTCACATGGCTTTTTGCACAGGGACCTGGCTGCACGCAACTGCATGTTGGGGGATGACTTGCGCGTgtgtgtggctgactttggcctCTCCAAGAAGACATACAGCAACAactactacagacagacagtgactatCCGAATGCCGGTCAAGTGGATGGCCATAGAGAGCCTTTCAGAGTCCATCTTTACTAGCAAGAGTGACGTGTGGTCATTTGCTGTCACCATGTGGGAGATAGTGTCCAGGGGAAGGACACCGTATCCTGGGGTCCACAACCATGAGCTCCTGGAGCTGCTGAACGCTGGACACAGACTCAAGCTTCCTGAGTGTGATGACAAACTTTATGAGGTGATGCTGAGTTGTTGGCACAGGGAGCCAGGACACAGGCCTGATTTCAGGGAGCTGGGGGAGACGCTCAAAGCCCTTCTGTTTGAGCTGCCCCCGCTGGAGGCCAGCCAGGAGGCCCACTACATCAACCAGGGCCTGGAGGCTGCCACTTACAGTCCGTGGGTTGCCGAAGGATATGACAACCCCGGTTTCGAGGAGGGCGCAGTGGGGAACGTGTACCTGCCCACCCCTGTGGGGGCTGGGACTAATGCTAAACCTCCACCAAAGAAAGATGAGGAAGGATATATGTTGTGTACGAAAACTGAGTCTGCTGTGTAGACAGTGGATTAGGAAGGCATTGTGGGTGGTTTATAGATGATATTTGTGAAAGAGACTCTGCTTTTTAAAAACGTTCTCTGGTGTTTTTGTGTTTCAGTCAGTTTGGTGTTTTATGTTCTGTCAGCTACGGTTATAGCCTACAACAATCCAAGCGTGTATGAATGTGTTTATTCCATGCGTCATCTCTGTGGTTAGATACCTCGGCACAAATCAACATATCAAATTTCGATAAATTCAAATCACCTTGACACTTTTATTAGTACAGTATCTTGCtctccctatgtgtgtgtgtgtgtgtggcagacagATTGCTGGACATTACCTTCTCTACTGATGATTGGTGTGCCACAATGTTTCTCCAACTTCTGTAAATAATGTTTGATaatcaaatatgttttttttatataatgaACATTGTTTTAGGGATGATCTTTCAAACCCATAACTACATAAAAGCATTACATTTTTCCAGAGTTCAAATTTGCATGA
>XM_036958174.1
AGGGGTGAGTGGAGGAGGGAACAAAAAGTAATGGAATAGCCTTCAGGCGTAGCGACATTCTTATGGTCAAACTGAGGATTCCAGGCTGAAAGAATTTCCCGCTATCGCAATATGACCAAAATATTTGACATGTAGCCCAGTTTAGCTATAGACGTCTTACAGACCAAATGCATTGTGAAAAAAAGTGGTTCCTGTTTAAACTTCTTCATAATAGCACTTCGTCATCGCTTGAAGACAGCGTGTTCTGATGTATATTGACAGCACTTGAGAAGACTGGGAAGTGTGCGGACGATGTCGGTCGTCAGGTGGAATGTTGTACTTTGGTTATGTATATACTGTGGCTGCACCTTTGCGCAAACAACCTCCGGAGAAGTGGAGTGAGAAATTACTGAAGATGGGTTCAGAGACCCAAGTCCCAGTCTATCAAGCCTGCGCTGTCAATAACAAACCCAGTTCAAGATCACTACTGACTAATTGGATTGCACGGAAGGATGCCCTGCACCTGCTATTGGACCTACAATTCGCCCAGGAAGAGGAGTCATCATCTAATCAGCTGAGTCCACTCCAGGTCCACCTTCTGGAATCAGACTCTCCACTCACCAAATTTAGTGAATCCCAGAATCCCCTCAATCTAAAAACCTCTCAGACTTTCAGCGCCACAACAGAAGTGCATCAGATCAAGGAGTACCTTAAAAACAGCCTGGAATTAGTGTTAAACACTGAGCCTCTCTCACACAACGGCTTCCATCTTGGATTCACCTACTCAGGGCCCTGCATCTTCCTATCCTCTGTCAGGCTGTACTACAGGAGATGTACTCGTTTGGTCAGCCACCTTGTTGGGTTTGAGGGAGCGTCTGCAGGAGCGGGGCCATTGACAGGGTCCTGTGTTGAAGGCGCCGTGGGGGTAGAGGGGCAAGTGGAGCCCCCTCAGAGGGAGTGCCAGGTGAATGGGGCGTGGGGTCCACTGCAAGGGGGGTGCACCTGCGCCCCGGGTCACCAAGAAAAGGTGGACTCTTGTGAAGCCTGTGGAGTTGGATACTACAAGGCAGCCAATGAGAGTGGGGGTTGTCGCTCGTGTCCACCCAACAGGAAGACGGACAGGGAGGGTGCAGAAGGGTGTGACTGTCGTCAGGGGTACTTCAGCCTCCCGGGTGACCCGTATGTCATGGGGTGCACACGACCACCCTCTGCTCCTGTAAATGTAACAGTCCAGCGCCTCAATGACTCAATACTGACTCTGCTTTGGGACCCTCCCATTGACCTGGGGGGGAGGCAGGAAGTGATGTATGACGTGGAatgctcagagagagagggagggactgaTGGTCAGTGGGCAGTGTGTGGGGAGGCGGTCATCTTTCTTCCTGCCTCAGCGGGACTGACCGTCACTGCAGTCAACCTCACATGGGTCAGCCCATGGTCGGACTACCGGCTGTCGGTCCAGGCAAGAAATTATGTGTCATTCCACCAGGGGGCAGCAGCGTCATCAACAGCATCCATAATCATTCATAGATGGAAATCTCTAGTGATAAACACCCCTGGTTCCATCCCCCTGGATCCCCACCACTCCCATGTGGAAGGTCCCTCTCCCTGGCTGATCATAGGAGCTCTACTGGGAGTCCTACTGCTGTTGATTCTGGTCCCTGCTGCTGTTTATTCTTTGCTACGCAAATACACCAAGCTCAGtcATGACCAGGAGGTGGAGCTGCTGCCTTCTCCCTCAGGTGTGAGCTATGGTCGTAATGAGGGCCCACACGCTGCCCCTCAGGAAGACAACATGGTGTTGGTACCTGGTGTGGTTCAGTTGCTGGAGAGTGTTGGTGACAAACTACTTACCAGTCTGAGGGATGTCCTGGTGGACAGGAACCAGCTGACCCTGGGAAAGGAGCTGGGAGCTGGAGAGTTTGGCTCTGTCTACGAGGGGATCTTTACTCCAGAGGAAGGGATAGACATCAAAGTAGCTGTCAAGACTATGAGAGTTGGACTCGACAGGCAGGAGGACTTAGAGTCGTTTCTGAAGGAAGCAGAGATCATGCAGCACTTTGACCATAAAAACGTTGTCAAACTTCTTGGGGTCACCTTGGAGCAGGATTCTCCTTTGCCAGTCCCTCTGGTGATACTACCCTTCATGAAGCATGGAGACCTGCGCCGGTTCCTCATCGCTACCCGCTACGGGGATATTCccatgTTTGTGCCTCACCAGAGTCTTCTGCGCTTCATGGTTGACATTGCAGCAGGGATGGAGTATCTGAGTTCACATGGCTTTTTGCACAGGGACCTGGCTGCACGCAACTGCATGTTGGGGGATGACTTGCGCGTgtgtgtggctgactttggcctCTCCAAGAAGACATACAGCAACAactactacagacagacagtgactatCCGAATGCCGGTCAAGTGGATGGCCATAGAGAGCCTTTCAGAGTCCATCTTTACTAGCAAGAGTGACGTGTGGTCATTTGCTGTCACCATGTGGGAGATAGTGTCCAGGGGAAGGACACCGTATCCTGGGGTCCACAACCATGAGCTCCTGGAGCTGCTGAACGCTGGACACAGACTCAAGCTTCCTGAGTGTGATGACAAACTTTATGAGGTGATGCTGAGTTGTTGGCACAGGGAGCCAGGACACAGGCCTGATTTCAGGGAGCTGGGGGAGACGCTCAAAGCCCTTCTGTTTGAGCTGCCCCCGCTGGAGGCCAGCCAGGAGGCCCACTACATCAACCAGGGCCTGGAGGCTGCCACTTACAGTCCGTGGGTTGCCGAAGGATATGACAACCCCGGTTTCGAGGAGGGCGCAGTGGGGAACGTGTACCTGCCCACCCCTGTGGGGGCTGGGACTAATGCTAAACCTCCACCAAAGAAAGATGAGGAAGGATATATGTTGTGTACGAAAACTGAGTCTGCTGTGTAGACAGTGGATTAGGAAGGCATTGTGGGTGGTTTATAGATGATATTTGTGAAAGAGACTCTGCTTTTTAAAAACGTTCTCTGGTGTTTTTGTGTTTCAGTCAGTTTGGTGTTTTATGTTCTGTCAGCTACGGTTATAGCCTACAACAATCCAAGCGTGTATGAATGTGTTTATTCCATGCGTCATCTCTGTGGTTAGATACCTCGGCACAAATCAACATATCAAATTTCGATAAATTCAAATCACCTTGACACTTTTATTAGTACAGTATCTTGCtctccctatgtgtgtgtgtgtgtgtggcagacagATTGCTGGACATTACCTTCTCTACTGATGATTGGTGTGCCACAATGTTTCTCCAACTTCTGTAAATAATGTTTGATaatcaaatatgttttttttatataatgaACATTGTTTTAGGGATGATCTTTCAAACCCATAACTACATAAAAGCATTACATTTTTCCAGAGTTCAAATTTGCATGA

Function

NR:

description
tyrosine-protein kinase receptor TYRO3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958173.1 False 3478 mRNA 0.50 15 53335916 53347700
XM_036958174.1 True 3406 mRNA 0.50 14 53335923 53347700

Neighbor

gene id symbol gene type direction distance location
LOC110500887 LOC106608584 coding upstream 5262 53268513 ~ 53330654 (+)
LOC110500722 NA coding upstream 79256 53251413 ~ 53256660 (+)
cth1 LOC106608603 coding upstream 85258 53248674 ~ 53250658 (+)
LOC110500719 LOC106608586 coding upstream 90737 53215229 ~ 53245179 (+)
LOC110500717 LOC106608585 coding upstream 120933 53164111 ~ 53214983 (+)
rab1ba LOC100695098 coding downstream 813 53348513 ~ 53367113 (+)
LOC110500724 LOC106608582 coding downstream 58346 53406046 ~ 53418358 (+)
LOC110500725 LOC106608581 coding downstream 152423 53500123 ~ 53505026 (+)
LOC110500727 LOC106608576 coding downstream 388304 53736004 ~ 53891327 (+)
LOC118942947 NA coding downstream 421987 53769687 ~ 53773325 (+)
G1751883 NA non-coding upstream 48429 53287190 ~ 53287487 (+)
G1751863 NA non-coding upstream 69116 53266285 ~ 53266800 (+)
G1751865 NA non-coding upstream 75208 53260365 ~ 53260708 (+)
G1751821 NA non-coding upstream 175092 53160568 ~ 53160824 (+)
G1751905 NA non-coding downstream 7718 53355418 ~ 53356897 (+)
G1751906 NA non-coding downstream 10028 53357728 ~ 53360510 (+)
G1751922 NA non-coding downstream 67568 53415268 ~ 53415502 (+)
G1751912 NA non-coding downstream 70841 53418541 ~ 53419324 (+)
G1751913 NA non-coding downstream 71693 53419393 ~ 53421659 (+)
G1751699 LOC106608599 other upstream 363533 52962449 ~ 52972383 (+)
G1750050 NA other upstream 1138909 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 1240811 52094709 ~ 52095105 (+)
G1750012 NA other upstream 1256914 52071600 ~ 52079002 (+)
LOC110500735 ablim2 other downstream 858998 54206483 ~ 54342581 (+)
G1753100 NA other downstream 1653879 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 2242905 55590450 ~ 55592100 (+)
G1755158 NA other downstream 3038707 56386407 ~ 56387622 (+)
G1755570 NA other downstream 3446031 56793731 ~ 56794574 (+)

Expression


Co-expression Network