Gene
RNA
| Item | Value |
|---|---|
| gene id | G1742420 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 45533961 ~ 45534179 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1995380 | True | 219 | lncRNA | 0.36 | 1 | 45533961 | 45534179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500870 | LOC106608752 | coding | upstream | 16728 | 45485247 ~ 45517233 (+) |
| nectin4a | LOC106608750 | coding | upstream | 59047 | 45455659 ~ 45474914 (+) |
| fcer1g | LOC106608748 | coding | upstream | 84249 | 45444361 ~ 45449712 (+) |
| ndufs2 | ndufs2 | coding | upstream | 89764 | 45432580 ~ 45444197 (+) |
| kirrel1a | LOC106608745 | coding | upstream | 114788 | 45379310 ~ 45419173 (+) |
| si:dkey-38p12.3 | LOC106608755 | coding | downstream | 10337 | 45544516 ~ 45565742 (+) |
| si:dkey-19b23.7 | LOC106608757 | coding | downstream | 108682 | 45642861 ~ 45648249 (+) |
| LOC110500572 | LOC106608759 | coding | downstream | 143482 | 45677661 ~ 45686049 (+) |
| LOC110500573 | LOC106608761 | coding | downstream | 154271 | 45688450 ~ 45702662 (+) |
| LOC110500577 | lsmd1 | coding | downstream | 210431 | 45744610 ~ 45755368 (+) |
| G1742383 | NA | non-coding | upstream | 7349 | 45526352 ~ 45526612 (+) |
| G1742381 | NA | non-coding | upstream | 8238 | 45525377 ~ 45525723 (+) |
| G1742416 | NA | non-coding | upstream | 11521 | 45522127 ~ 45522440 (+) |
| G1742379 | NA | non-coding | upstream | 12273 | 45480475 ~ 45521688 (+) |
| G1742371 | NA | non-coding | upstream | 107014 | 45422297 ~ 45426947 (+) |
| G1742421 | LOC106608754 | non-coding | downstream | 513 | 45534692 ~ 45534908 (+) |
| G1742422 | LOC106608754 | non-coding | downstream | 933 | 45535112 ~ 45535449 (+) |
| G1742423 | LOC106608754 | non-coding | downstream | 1449 | 45535628 ~ 45535902 (+) |
| G1742424 | NA | non-coding | downstream | 2575 | 45536754 ~ 45536992 (+) |
| G1742425 | NA | non-coding | downstream | 2884 | 45537063 ~ 45537424 (+) |
| LOC110500529 | LOC106608720 | other | upstream | 1061397 | 44461338 ~ 44480565 (+) |
| LOC110500528 | tmem256 | other | upstream | 1082429 | 44446186 ~ 44451532 (+) |
| G1740752 | NA | other | upstream | 1320731 | 44212786 ~ 44213230 (+) |
| G1743043 | NA | other | downstream | 105117 | 45639296 ~ 45639742 (+) |
| G1743077 | NA | other | downstream | 172963 | 45707142 ~ 45709950 (+) |
| G1744645 | NA | other | downstream | 1629725 | 47163904 ~ 47236823 (+) |
| G1746210 | NA | other | downstream | 2560588 | 48094767 ~ 48095119 (+) |
