G1743060


Basic Information

Item Value
gene id G1743060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45664994 ~ 45665215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996106
tatatgggggatacaatcttcccagctctgaaGATTTTGCtgcgaggaggcagagtcattagatcatttattttggtactgtccatatgtagctcgtttttgttCACAGGTCCAGGAAAGGCTGAAGAAtcgcaacatttacctggagctaacgctgcagatatcaatactgggtgatttgaaaagtcatagtcaatcgatcaataatataaatcattttac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996106 True 222 lncRNA 0.39 1 45664994 45665215

Neighbor

gene id symbol gene type direction distance location
si:dkey-19b23.7 LOC106608757 coding upstream 16745 45642861 ~ 45648249 (+)
si:dkey-38p12.3 LOC106608755 coding upstream 99252 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 coding upstream 147761 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 190080 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 215282 45444361 ~ 45449712 (+)
LOC110500572 LOC106608759 coding downstream 12446 45677661 ~ 45686049 (+)
LOC110500573 LOC106608761 coding downstream 23235 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 79395 45744610 ~ 45755368 (+)
cnpy4 cnpy4 coding downstream 182971 45848186 ~ 45850007 (+)
LOC110500584 LOC106608769 coding downstream 204672 45869887 ~ 45888657 (+)
G1743039 NA non-coding upstream 31618 45633138 ~ 45633376 (+)
G1743037 NA non-coding upstream 34023 45630695 ~ 45630971 (+)
G1743011 NA non-coding upstream 36545 45582928 ~ 45628449 (+)
G1743007 NA non-coding upstream 37849 45581584 ~ 45627145 (+)
G1743004 NA non-coding upstream 38273 45580899 ~ 45626721 (+)
G1743068 NA non-coding downstream 9426 45674641 ~ 45674846 (+)
G1743069 NA non-coding downstream 9891 45675106 ~ 45675347 (+)
G1743070 NA non-coding downstream 10225 45675440 ~ 45675842 (+)
G1743076 NA non-coding downstream 37961 45703176 ~ 45706460 (+)
G1743087 NA non-coding downstream 47488 45712703 ~ 45712910 (+)
G1743043 NA other upstream 25252 45639296 ~ 45639742 (+)
LOC110500529 LOC106608720 other upstream 1192430 44461338 ~ 44480565 (+)
G1743077 NA other downstream 41927 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1498689 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2429552 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2659885 48325100 ~ 48363926 (+)
G1747255 NA other downstream 3312111 48977326 ~ 48977758 (+)

Expression


Co-expression Network