G1743070


Basic Information

Item Value
gene id G1743070
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45675440 ~ 45675842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996116
attgtttaacttgggtcaaacatttaatgtagtcttccacaagcttcccacaataagttgggtgaattttggcccattcctcctgacagagctggtgtaactgagtcaggtttgtaggcatccttgctcgcacatgctttttcagttcagcccacaaatgttctataggattgaggtcagggctttgtgatggccactctaatacctttgTTGTCTActactttgttgcccttaagccattttgccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccaagctataactgatgtcttgagatgttgcttcaatatatccacataattttcctgcctcatgatgccatatattttgtgaagtgtaccagtccctcctgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996116 True 403 lncRNA 0.43 1 45675440 45675842

Neighbor

gene id symbol gene type direction distance location
si:dkey-19b23.7 LOC106608757 coding upstream 27191 45642861 ~ 45648249 (+)
si:dkey-38p12.3 LOC106608755 coding upstream 109698 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 coding upstream 158207 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 200526 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 225728 45444361 ~ 45449712 (+)
LOC110500572 LOC106608759 coding downstream 1819 45677661 ~ 45686049 (+)
LOC110500573 LOC106608761 coding downstream 12608 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 68768 45744610 ~ 45755368 (+)
cnpy4 cnpy4 coding downstream 172344 45848186 ~ 45850007 (+)
LOC110500584 LOC106608769 coding downstream 194045 45869887 ~ 45888657 (+)
G1743069 NA non-coding upstream 93 45675106 ~ 45675347 (+)
G1743068 NA non-coding upstream 594 45674641 ~ 45674846 (+)
G1743060 NA non-coding upstream 10225 45664994 ~ 45665215 (+)
G1743039 NA non-coding upstream 42064 45633138 ~ 45633376 (+)
G1743037 NA non-coding upstream 44469 45630695 ~ 45630971 (+)
G1743076 NA non-coding downstream 27334 45703176 ~ 45706460 (+)
G1743087 NA non-coding downstream 36861 45712703 ~ 45712910 (+)
G1743089 NA non-coding downstream 40069 45715911 ~ 45716144 (+)
G1743090 NA non-coding downstream 42131 45717973 ~ 45718186 (+)
G1743091 LOC106608762 non-coding downstream 42545 45718387 ~ 45718742 (+)
G1743043 NA other upstream 35698 45639296 ~ 45639742 (+)
LOC110500529 LOC106608720 other upstream 1202876 44461338 ~ 44480565 (+)
G1743077 NA other downstream 31300 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1488062 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2418925 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2649258 48325100 ~ 48363926 (+)
G1747255 NA other downstream 3301484 48977326 ~ 48977758 (+)

Expression


Co-expression Network