G1743076


Basic Information

Item Value
gene id G1743076
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45703176 ~ 45706460 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996123
gtttatttttattaCAAACAAAACCCCAAATAAAAGACAAAGAGATGCATTATTATTGTGGCATCACTGCCACTCATTGTTTCATCGATCGGCATCACAACAACGTACACAGTAACACAAGGTATCaagaaatgaaaaacaaaagaaaatcgggaaaaaaaagaGCAAAAGAAATAAAATGAGAAAAGAAGTGCTTGATTTGACAGTATACATTCTAGTTACGGGGTTGCAAAACACTTCCTGCCAAACGTAATCGGTGAAATGTTGCTTAGAGTCTTCAACTTGGAACACCACTGTGGAGTATCCAGGGTGTTAGCTAAATAAATTAAATGTTTCTACTTTAATTATTTGAAATAAGTGCAGGGAACTAACTAAAAGTAGACTATTTCAACTAGCATATATAGAGTTTACATCTCCTGATCTATTCAGGTTTAATACACTTAATTCAGACGTAACTTTCTTTACAGTTATTTCAGCTATGTTATGTTTAAGGCGTATTTGTGGATACAGTATATAAAATTGACTCGATTCAACTAACAGCCTCTGAGTTTCCAAAGAATAATGAATTAATGTACTTTAACTGTTAAGATCGTACACCGTTTCATTTAGTCTTTAACGCATTTAGGGTTACATATGTAATCTATTATAAAGGTTATTTGCAAGCCCCaaatctagaatgtcattttttttttttgtattatatCTATCTATGAAGTTCAAAGGTCAACCTCTGTTTGCTTTCTGTTCTGACTATAAGATGTCAGATGCAGCATAAGAAATGCACCAAATCATAAGATTTTATCGTTTTCTCAATTTCTCATTTGGTAAAAGCTCTTTTTTCAATAGTAACAGCAAAGACAACAGCAACTtcgacaacaacaataataatcatAGTCGTAGTAAGTTAACAAGAGTAAAAACACGAGAACACGAATGAGCCAAGTTTAAATATGCAAAGAATATCACAGAATTCGTAGAAAGAAGTAGAAACTCGAAAAAGACAAACAAGGAAGAAAGGGTTGAtcgagaggaagaggaagagaaaaggGGGATAGAAGCCAGAGGAAGGGAGGTCAGAGAGAgcaaggggagaggaggactgtaGTTGAGGGTAGTCAAGAAGCTTTATAACACTGTATGACTTGCCTATGAAAGGTTATGACCATTCACAGGTGTTCTGAAACTATCCATTTGATTGCTGTGAGTGAGACCTATCCTGAACCAGCACCGGAACCTCCCAtcccaataaaataaaataataatatgcaCCCTGGTCTGTAAGAACATCCACTACGCTATACCTCACTCAGTCAAGTTGGAGTTAAACTTGACTGACTGTTCAGTATTTCTAAATGGACCATCAGGTCAACATGAAAGGGAAATGGGCTGAGAGTTTCCTGCCAAGTTTAGAGCCCCCTGAGTCCTATAATACTTCACATCAATTCTCCAACAGGACGATTGATGGTTTTCGGCGAGCCTCTGAGACAACACTAGAAGAAATACTGTAGGCACAACTTGAATGATAACACACCATTTTTTAGTGAGTATTGCATGCGTCAGAGGACGAATGGCGGGAATGGTGTTAAGAGTCAAatgttatactgttatattatGCAGCTTCCTGTTACTGGAGCGACCTGTGGAAGGGTCAAAGGTCAAGCTCTGTAGTGGTTATTGGTTCTAGGTATTTGGTGTTGAGAGGTTGAGGGTCTGTGAGCGGTGCCAGGATAAAGAGGTTCTAGCTTATGGTACTACATGTATATTGttctggagtggagtggagaccTATGAGTATTAGTAGGTTGCTTGTGAGGAGTATTGGTTGGTTTGAGGCAGACAATAAGAGATTGAGCAGGTGagggtatgtatgtgtgtaacaGCGTAGACcacgttggtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtatacacGTGTGTGCACACGTGTATATGTTAatctgtttgtatgtgtgtgtgagagtgtgtgtgcgtgtcaaggttattatagtaaatgAAAACTGAAACGAAAAGGGAAATTAAATAATTTTACACCTCTGtttgaaaaactaaaactatACTGAAAATATTATCTCTGACTCCAAAAcgaattaaaataaaataaaaccatcATGAATTatgttcatttttatttttatttatttttattttttactttgagCAAAAATCAAATGGAGTTTTCAAGCTTCTGAATCTGGGCTGTTTCAAATAGACCTAGCTTGTGCATCACTATAACTAGTTATTCCCAGAAATACTTGAAGATATTAGGAGATGGGAAACTCGTGTATGTTGCCCGTAAATTGTCAATGGGCCGTGCGGTGCATTTGGAGCGATTCTGGGACAAGGAGCGCAACTCCTTCAAGGCTTGAATGGGAGTCAATTGGGTGCTagcaaaaaataaaacattagcatgaattccaggctgtatcacaaccggccgtgattgggagtcccatgcaattggcccagcgttgtccgggttagggtttggccagggtaggctgtcattgtaaataagaattggttcttgcctagttaaataaaggttaaataaaaaataaaataaacatttaaatatgAATTAGCCTCCCAGAACAAGAAACACAATATTACACATATTTTCCAAGATGTGAGATAATTAACTTGTTCTCTGTAATATGGTATAGCTTTGAAATAGTGACTTTACGTACATTCGAGAACAATAGGCATGTTTCTAGTCTCGTGCCCTGACTTTTACAAGGGATTGCGTGACGATTAGCTTAGCAACCACATTACACAGCATGACAACGTGAACGCGATTGGTCGACAGTCTGGGTGTTAAACGTGCCTTCATTCCTTGACCAATGAGATTCCTCTCCTCATTTCCTAAACTATTTCTGCTGTCACTAGCTAATAGGGAAGAAATCCGCTATTTTCTGTCACTATAACTAAATaatataaaacaaaatataaatatttttataaaACTCAAACTAAATAATAACTAGTAAACCAGGTCTGAAAACGAACTGAAACTAAACTGAATACATTTTTTATGTAGAAATAAAAACGAATAGAAAAACACAAACTAtaataacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtcagtgaGTGGTGTTATTTAGTCGTCGATACAGATGACTTCCCCAAAGCGCTGGTCTCTCCTGCTCAGGAGCTGCTCGGCTTCCCTCTCCTTCTTCACTGACAAGGGAGGCCCGTT

Function

NR:

description
PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996123 True 3285 lncRNA 0.38 1 45703176 45706460

Neighbor

gene id symbol gene type direction distance location
LOC110500573 LOC106608761 coding upstream 514 45688450 ~ 45702662 (+)
LOC110500572 LOC106608759 coding upstream 17127 45677661 ~ 45686049 (+)
si:dkey-19b23.7 LOC106608757 coding upstream 54927 45642861 ~ 45648249 (+)
si:dkey-38p12.3 LOC106608755 coding upstream 137434 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 coding upstream 185943 45485247 ~ 45517233 (+)
LOC110500577 lsmd1 coding downstream 38150 45744610 ~ 45755368 (+)
cnpy4 cnpy4 coding downstream 141726 45848186 ~ 45850007 (+)
LOC110500584 LOC106608769 coding downstream 163427 45869887 ~ 45888657 (+)
LOC110500588 LOC106608772 coding downstream 235697 45942157 ~ 45944870 (+)
LOC110500591 LOC106608776 coding downstream 309962 46016422 ~ 46020567 (+)
G1743070 NA non-coding upstream 27334 45675440 ~ 45675842 (+)
G1743069 NA non-coding upstream 27829 45675106 ~ 45675347 (+)
G1743068 NA non-coding upstream 28330 45674641 ~ 45674846 (+)
G1743060 NA non-coding upstream 37961 45664994 ~ 45665215 (+)
G1743039 NA non-coding upstream 69800 45633138 ~ 45633376 (+)
G1743087 NA non-coding downstream 6243 45712703 ~ 45712910 (+)
G1743089 NA non-coding downstream 9451 45715911 ~ 45716144 (+)
G1743090 NA non-coding downstream 11513 45717973 ~ 45718186 (+)
G1743091 LOC106608762 non-coding downstream 11927 45718387 ~ 45718742 (+)
G1743092 NA non-coding downstream 13286 45719746 ~ 45720436 (+)
G1743043 NA other upstream 63434 45639296 ~ 45639742 (+)
fcer1g LOC106608748 other upstream 254489 45444361 ~ 45449712 (+)
LOC110500529 LOC106608720 other upstream 1230612 44461338 ~ 44480565 (+)
G1743077 NA other downstream 682 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1457444 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2388307 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2618640 48325100 ~ 48363926 (+)
G1747255 NA other downstream 3270866 48977326 ~ 48977758 (+)

Expression


Co-expression Network