G1746393


Basic Information

Item Value
gene id G1746393
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 48241503 ~ 48241734 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1999671
agagaactggaaggaaaggcgaccaaaagcggtgttggctttggggatgaccagtgaaatacacctgctggagcgcgtgcgacgggtgggtgttgctatggtgaccagtgagctgagataaggacctttacctagcaaagacttatagatgaccaggagccagtgggtttggcaacgaatatgtagcgagggccagccaactagagcatacaggtcgcagtggtgggtagta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1999671 True 232 lncRNA 0.53 1 48241503 48241734

Neighbor

gene id symbol gene type direction distance location
LOC110500605 LOC106608606 coding upstream 283486 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 1128441 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 1974581 46216617 ~ 46266922 (+)
LOC118936379 LOC106608786 coding upstream 2019312 46218549 ~ 46222191 (+)
LOC110500598 LOC106608783 coding upstream 2030946 46201831 ~ 46210557 (+)
LOC110500610 LOC106608613 coding downstream 141120 48382854 ~ 48414134 (+)
LOC110500624 LOC106608622 coding downstream 1351652 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 1364365 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 1369517 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 1412958 49654692 ~ 49662658 (+)
G1746365 NA non-coding upstream 19697 48221547 ~ 48221806 (+)
G1746311 NA non-coding upstream 60237 48180734 ~ 48181266 (+)
G1746310 NA non-coding upstream 61781 48179509 ~ 48179722 (+)
G1746244 NA non-coding upstream 118362 48122942 ~ 48123141 (+)
G1746193 NA non-coding upstream 159720 48081558 ~ 48081783 (+)
G1746601 NA non-coding downstream 288549 48530283 ~ 48530663 (+)
G1746665 NA non-coding downstream 367230 48608964 ~ 48707627 (+)
G1746698 NA non-coding downstream 414340 48656074 ~ 48656446 (+)
G1746701 NA non-coding downstream 416054 48657788 ~ 48658323 (+)
G1746753 NA non-coding downstream 492669 48734403 ~ 48734660 (+)
G1746210 NA other upstream 146384 48094767 ~ 48095119 (+)
G1744645 NA other upstream 1073849 47163904 ~ 47236823 (+)
G1743077 NA other upstream 2531553 45707142 ~ 45709950 (+)
G1743043 NA other upstream 2601761 45639296 ~ 45639742 (+)
si:dkey-38p12.3 LOC106608755 other upstream 2685914 45544516 ~ 45565742 (+)
G1746471 LOC106608612 other downstream 83366 48325100 ~ 48363926 (+)
G1747255 NA other downstream 735592 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 1204105 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 2357176 50598799 ~ 50615280 (+)

Expression


Co-expression Network