G1746601


Basic Information

Item Value
gene id G1746601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 48530283 ~ 48530663 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1999891
AATTGATGACACATGTGCAGGTGATAATTGTGCATTATAATGAATCATTTCTGCTGACATCTGGCTCGAGGTGTAAACATTGAGGTGTAAACAAAGAAGTGTAAACAAAGAGGTGTAAACATTGAGGTGTAAACAATGAGGTGTAAACAATGAGGTGTAAACATTGAGGTGTAAACAATGAGGTGTAAACATTGGGGTGTAAACATTGAGGTGTAAACATTGAGGTGTAAACTTTGAAAATGAGGGTAATAACACTCCAGCAGTAAATCAAATTATACGATCATGAACACAAACACAACTAAGTAAACTATCAAAACGGTAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1999891 True 325 lncRNA 0.36 2 48530283 48530663

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 116149 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 572266 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 1417221 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 2263361 46216617 ~ 46266922 (+)
LOC118936379 LOC106608786 coding upstream 2308092 46218549 ~ 46222191 (+)
LOC110500624 LOC106608622 coding downstream 1062723 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 1075436 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 1080588 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 1124029 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 1150005 49680668 ~ 49772757 (+)
G1746393 NA non-coding upstream 288549 48241503 ~ 48241734 (+)
G1746365 NA non-coding upstream 308477 48221547 ~ 48221806 (+)
G1746311 NA non-coding upstream 349017 48180734 ~ 48181266 (+)
G1746310 NA non-coding upstream 350561 48179509 ~ 48179722 (+)
G1746244 NA non-coding upstream 407142 48122942 ~ 48123141 (+)
G1746665 NA non-coding downstream 78301 48608964 ~ 48707627 (+)
G1746698 NA non-coding downstream 125411 48656074 ~ 48656446 (+)
G1746701 NA non-coding downstream 127125 48657788 ~ 48658323 (+)
G1746753 NA non-coding downstream 203740 48734403 ~ 48734660 (+)
G1746765 NA non-coding downstream 227771 48758434 ~ 48758647 (+)
G1746471 LOC106608612 other upstream 166357 48325100 ~ 48363926 (+)
G1746210 NA other upstream 435164 48094767 ~ 48095119 (+)
G1744645 NA other upstream 1362629 47163904 ~ 47236823 (+)
G1743077 NA other upstream 2820333 45707142 ~ 45709950 (+)
G1743043 NA other upstream 2890541 45639296 ~ 45639742 (+)
G1747255 NA other downstream 446663 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 915176 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 2068247 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 2585782 51116362 ~ 51133346 (+)

Expression


Co-expression Network