G1747068


Basic Information

Item Value
gene id G1747068
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 48780587 ~ 48780920 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2000397
accccataatgacaaagcaaaaaaaggtttttagaaatgtttgcaaattgataaaacataaaaaacaaataccatatttacataagtattcagaccaattgctatgagactcgaaattgagatcatgtgcttcctgtttccattgatcatccttgagatatttctacaacttgattggagtccatctgtggtaaattcaattgattgaacacgatttggaaaggcacacacctgtctatgtaaggtcccatgGTTGACAGTCCTTCTCAGAGAAAagaatcaagccatgaggtcgaaggaattgtccgtagagcttcgagacaggattgtatcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2000397 True 334 lncRNA 0.37 1 48780587 48780920

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 366453 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 822570 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 1667525 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 2513665 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 812466 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 825179 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 830331 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 873772 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 899748 49680668 ~ 49772757 (+)
G1746766 NA non-coding upstream 21317 48758897 ~ 48759270 (+)
G1746765 NA non-coding upstream 21940 48758434 ~ 48758647 (+)
G1746753 NA non-coding upstream 45927 48734403 ~ 48734660 (+)
G1746665 NA non-coding upstream 72960 48608964 ~ 48707627 (+)
G1747082 NA non-coding downstream 12354 48793274 ~ 48793474 (+)
G1747110 NA non-coding downstream 34362 48815282 ~ 48815484 (+)
G1747123 NA non-coding downstream 53555 48834475 ~ 48873753 (+)
G1747138 NA non-coding downstream 78892 48859812 ~ 48860354 (+)
G1747214 NA non-coding downstream 134412 48915332 ~ 48918035 (+)
G1746471 LOC106608612 other upstream 416661 48325100 ~ 48363926 (+)
G1746210 NA other upstream 685468 48094767 ~ 48095119 (+)
G1744645 NA other upstream 1612933 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3070637 45707142 ~ 45709950 (+)
G1743043 NA other upstream 3140845 45639296 ~ 45639742 (+)
G1747255 NA other downstream 196406 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 664919 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1817990 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 2335525 51116362 ~ 51133346 (+)

Expression


Co-expression Network