G1747123


Basic Information

Item Value
gene id G1747123
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 48834475 ~ 48873753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2000453
gtaattaatttgcattttattgcataacataagtatttgatacatcagaaaagcagaacttaatatttggtacagaaacctttgtttgcaattacagagatcatacgtttcctgtagttcttgaccaggtttgcacacactgcagcagggattttggcccactcctccatacagaccttatccagatccttcaggtttcggggct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2000453 True 205 lncRNA 0.39 2 48834475 48873753

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 420341 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 876458 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 1721413 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 2567553 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 719633 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 732346 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 737498 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 780939 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 806915 49680668 ~ 49772757 (+)
G1747110 NA non-coding upstream 18991 48815282 ~ 48815484 (+)
G1747082 NA non-coding upstream 41001 48793274 ~ 48793474 (+)
G1747068 NA non-coding upstream 53555 48780587 ~ 48780920 (+)
G1746766 NA non-coding upstream 75205 48758897 ~ 48759270 (+)
G1746765 NA non-coding upstream 75828 48758434 ~ 48758647 (+)
G1747214 NA non-coding downstream 41579 48915332 ~ 48918035 (+)
G1747229 NA non-coding downstream 63232 48936985 ~ 48937255 (+)
G1747230 NA non-coding downstream 69066 48942819 ~ 48943232 (+)
G1747231 NA non-coding downstream 70174 48943927 ~ 48944282 (+)
G1747232 NA non-coding downstream 71907 48945660 ~ 48946013 (+)
G1746471 LOC106608612 other upstream 470549 48325100 ~ 48363926 (+)
G1746210 NA other upstream 739356 48094767 ~ 48095119 (+)
G1744645 NA other upstream 1666821 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3124525 45707142 ~ 45709950 (+)
G1743043 NA other upstream 3194733 45639296 ~ 45639742 (+)
G1747255 NA other downstream 103573 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 572086 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1725157 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 2242692 51116362 ~ 51133346 (+)

Expression


Co-expression Network