G1747237


Basic Information

Item Value
gene id G1747237
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 48953567 ~ 48953800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2000571
ATCTTTTACCTTGACTTCTGAGCATGGGTGTGGCTTTGTTTCCCCCTGTTTCAGGTCAGGGTGCTGCAGCAGGTAACCCTGGTCCGTGCCTGGACTTTGTGAGCAATGGAGCTGGGATGGAGGGATTTGGAGCTAGCACTTTTTGGGAAAACGGATTCTCCTGGAAAGAGTCGATTGTTCGAGACAGCTAGATAATCAGGTCGACAGCACTCACAGAGGACAAACACTTTATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2000571 True 234 lncRNA 0.50 1 48953567 48953800

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 539433 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 995550 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 1840505 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 2686645 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 639586 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 652299 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 657451 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 700892 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 726868 49680668 ~ 49772757 (+)
G1747236 NA non-coding upstream 2542 48950771 ~ 48951025 (+)
G1747234 NA non-coding upstream 5093 48948200 ~ 48948474 (+)
G1747232 NA non-coding upstream 7554 48945660 ~ 48946013 (+)
G1747231 NA non-coding upstream 9285 48943927 ~ 48944282 (+)
G1747230 NA non-coding upstream 10335 48942819 ~ 48943232 (+)
G1747239 NA non-coding downstream 1135 48954935 ~ 48955190 (+)
G1747241 NA non-coding downstream 4807 48958607 ~ 48958836 (+)
G1747245 NA non-coding downstream 10408 48964208 ~ 48964444 (+)
G1747250 NA non-coding downstream 15672 48969472 ~ 48970115 (+)
G1747253 NA non-coding downstream 21303 48975103 ~ 48975390 (+)
G1746471 LOC106608612 other upstream 589641 48325100 ~ 48363926 (+)
G1746210 NA other upstream 858448 48094767 ~ 48095119 (+)
G1744645 NA other upstream 1785913 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3243617 45707142 ~ 45709950 (+)
G1743043 NA other upstream 3313825 45639296 ~ 45639742 (+)
G1747255 NA other downstream 23526 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 492039 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1645110 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 2162645 51116362 ~ 51133346 (+)

Expression


Co-expression Network