G1747329


Basic Information

Item Value
gene id G1747329
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49113550 ~ 49113764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2000663
acacagatgagtaGGGATCCTGGgcgtctttcttttggtgtttttcagagaaTGTAGAAAGGcctatttttttgctgagtttatataggtcaaataggggagaggcattgtgccatgagatgttgctttatctgctttttgaaaacaggttttctgTTCATTttagcaatatgagatggaagggagttccatgcaacaatggctatatataatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2000663 True 215 lncRNA 0.38 1 49113550 49113764

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 699416 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1155533 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2000488 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 2846628 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 479622 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 492335 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 497487 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 540928 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 566904 49680668 ~ 49772757 (+)
G1747328 NA non-coding upstream 1039 49112238 ~ 49112511 (+)
G1747311 NA non-coding upstream 39695 49073619 ~ 49073855 (+)
G1747260 NA non-coding upstream 122475 48990807 ~ 48991075 (+)
G1747253 NA non-coding upstream 138160 48975103 ~ 48975390 (+)
G1747250 NA non-coding upstream 143435 48969472 ~ 48970115 (+)
G1747340 NA non-coding downstream 22162 49135926 ~ 49160412 (+)
G1747357 NA non-coding downstream 59526 49173290 ~ 49173589 (+)
G1747366 NA non-coding downstream 73624 49187388 ~ 49187617 (+)
G1747369 NA non-coding downstream 77565 49191329 ~ 49191600 (+)
G1747370 NA non-coding downstream 81245 49195009 ~ 49195238 (+)
G1747255 NA other upstream 135792 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 749624 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1018431 48094767 ~ 48095119 (+)
G1744645 NA other upstream 1945896 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3403600 45707142 ~ 45709950 (+)
G1747814 LOC106606817 other downstream 332075 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1485146 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 2002681 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 2020325 51134089 ~ 51142008 (+)

Expression


Co-expression Network