G1747340


Basic Information

Item Value
gene id G1747340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49135926 ~ 49160412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2000674
gtcagtgtgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtctctcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggatgttgtccttgatgatctttatggccttcctgtgacatcgggtggtgtgggtgtcctggagggcaggtagtttgcccccggtgatgcgttgtgcagacctcactaccctctggagagccttacggtt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2000674 True 293 lncRNA 0.54 2 49135926 49160412

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 721792 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1177909 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2022864 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 2869004 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 432974 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 445687 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 450839 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 494280 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 520256 49680668 ~ 49772757 (+)
G1747329 NA non-coding upstream 22162 49113550 ~ 49113764 (+)
G1747328 NA non-coding upstream 23415 49112238 ~ 49112511 (+)
G1747311 NA non-coding upstream 62071 49073619 ~ 49073855 (+)
G1747260 NA non-coding upstream 144851 48990807 ~ 48991075 (+)
G1747253 NA non-coding upstream 160536 48975103 ~ 48975390 (+)
G1747357 NA non-coding downstream 12878 49173290 ~ 49173589 (+)
G1747366 NA non-coding downstream 26976 49187388 ~ 49187617 (+)
G1747369 NA non-coding downstream 30917 49191329 ~ 49191600 (+)
G1747370 NA non-coding downstream 34597 49195009 ~ 49195238 (+)
G1747432 NA non-coding downstream 123546 49283958 ~ 49289181 (+)
G1747255 NA other upstream 158168 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 772000 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1040807 48094767 ~ 48095119 (+)
G1744645 NA other upstream 1968272 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3425976 45707142 ~ 45709950 (+)
G1747814 LOC106606817 other downstream 285427 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1438498 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1956033 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1973677 51134089 ~ 51142008 (+)

Expression


Co-expression Network