G1747357


Basic Information

Item Value
gene id G1747357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49173290 ~ 49173589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2000694
ttttcgcagctttttgttaaaaatcgcgcaacatttcaaagtcctgctactcatgccaggaatatagtatatgcatatgataagtatgtgtgtatagaaaacactctgaagtctctaaaactggtaaAATcgtgtctgtggctataacagagcgtttttaggagtaaaaatcccagggaaaactgttcaccaaaaacacaaaaaaaatattcatcCTCCAGTCAATGTATTGTCTAAGGCGACAGAAAATAGATGAGATTCCGATTacaatgcctacagcttccacacgatgttgCCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2000694 True 300 lncRNA 0.37 1 49173290 49173589

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 759156 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1215273 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2060228 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 2906368 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 419797 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 432510 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 437662 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 481103 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 507079 49680668 ~ 49772757 (+)
G1747340 NA non-coding upstream 12878 49135926 ~ 49160412 (+)
G1747329 NA non-coding upstream 59526 49113550 ~ 49113764 (+)
G1747328 NA non-coding upstream 60779 49112238 ~ 49112511 (+)
G1747311 NA non-coding upstream 99435 49073619 ~ 49073855 (+)
G1747260 NA non-coding upstream 182215 48990807 ~ 48991075 (+)
G1747366 NA non-coding downstream 13799 49187388 ~ 49187617 (+)
G1747369 NA non-coding downstream 17740 49191329 ~ 49191600 (+)
G1747370 NA non-coding downstream 21420 49195009 ~ 49195238 (+)
G1747432 NA non-coding downstream 110369 49283958 ~ 49289181 (+)
G1747438 NA non-coding downstream 123013 49296602 ~ 49297650 (+)
G1747255 NA other upstream 195532 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 809364 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1078171 48094767 ~ 48095119 (+)
G1744645 NA other upstream 2005636 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3463340 45707142 ~ 45709950 (+)
G1747814 LOC106606817 other downstream 272250 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1425321 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1942856 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1960500 51134089 ~ 51142008 (+)

Expression


Co-expression Network