G1747438


Basic Information

Item Value
gene id G1747438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49296602 ~ 49297650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2000785
ttctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtaccagtctcaggtcttttgcagactccatcaggttttctaccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaaggtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2000785 True 308 lncRNA 0.39 2 49296602 49297650

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 882468 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1338585 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2183540 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 3029680 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 295736 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 308449 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 313601 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 357042 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 383018 49680668 ~ 49772757 (+)
G1747432 NA non-coding upstream 7421 49283958 ~ 49289181 (+)
G1747370 NA non-coding upstream 101364 49195009 ~ 49195238 (+)
G1747369 NA non-coding upstream 105002 49191329 ~ 49191600 (+)
G1747366 NA non-coding upstream 108985 49187388 ~ 49187617 (+)
G1747357 NA non-coding upstream 123013 49173290 ~ 49173589 (+)
G1747445 NA non-coding downstream 21372 49319022 ~ 49319229 (+)
G1747734 NA non-coding downstream 73730 49371380 ~ 49371638 (+)
G1747735 NA non-coding downstream 75065 49372715 ~ 49373047 (+)
G1747738 NA non-coding downstream 76498 49374148 ~ 49374563 (+)
G1747776 NA non-coding downstream 116419 49414069 ~ 49414515 (+)
G1747255 NA other upstream 318844 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 932676 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1201483 48094767 ~ 48095119 (+)
G1744645 NA other upstream 2128948 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3586652 45707142 ~ 45709950 (+)
G1747814 LOC106606817 other downstream 148189 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1301260 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1818795 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1836439 51134089 ~ 51142008 (+)

Expression


Co-expression Network