G1747802


Basic Information

Item Value
gene id G1747802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49435775 ~ 49435982 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001169
GTAGTGCTGTGTAAACAGATAACGTATCAGTGTAAGCTTTGAAAATCACTCAAGAAAAGTGAGTGAGTCAATTTTAACGTTACAGACATTCAAAACACAACTCCACATCATATCATTCTCTCTGAGCGTCTGTAACAGTTCCTTGCTTAAATCCTCACTTTCAATTGAGAGAATGAAGATGACATTACAGCTTTGCGTAACTAACTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001169 True 208 lncRNA 0.36 1 49435775 49435982

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 1021641 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1477758 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2322713 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 3168853 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 157404 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 170117 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 175269 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 218710 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 244686 49680668 ~ 49772757 (+)
G1747780 NA non-coding upstream 18531 49417037 ~ 49417244 (+)
G1747776 NA non-coding upstream 21260 49414069 ~ 49414515 (+)
G1747738 NA non-coding upstream 61212 49374148 ~ 49374563 (+)
G1747735 NA non-coding upstream 62728 49372715 ~ 49373047 (+)
G1747734 NA non-coding upstream 64137 49371380 ~ 49371638 (+)
G1747816 NA non-coding downstream 11541 49447523 ~ 49448088 (+)
G1747818 NA non-coding downstream 12849 49448831 ~ 49449103 (+)
G1747831 NA non-coding downstream 20471 49456453 ~ 49457150 (+)
G1747833 LOC106608620 non-coding downstream 22266 49458248 ~ 49584762 (+)
G1747830 NA non-coding downstream 23706 49459688 ~ 49585172 (+)
G1747255 NA other upstream 458017 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1071849 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1340656 48094767 ~ 48095119 (+)
G1744645 NA other upstream 2268121 47163904 ~ 47236823 (+)
G1743077 NA other upstream 3725825 45707142 ~ 45709950 (+)
G1747814 LOC106606817 other downstream 9857 49445839 ~ 49446626 (+)
LOC110500883 LOC106577571 other downstream 1162928 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1680463 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1698107 51134089 ~ 51142008 (+)

Expression


Co-expression Network