G1747842


Basic Information

Item Value
gene id G1747842
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49478939 ~ 49485923 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001226
AAGATGGCCACCGAGACAGAGGAGCTATCCATgaagaaccactaagacggtgacaatcTCGTGACTTTTGTTATAGTTTAAAGATAATCGTATTGTGTTcctgtttcatctggagaagatgtatgtttttccttgggagattttcattgattatgttggagtgtttgtgttgaccaaatgccctcaatagagaactgtgttcaatcaagaaaacctactcctgactcgtttattccacctttccgctttag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001226 True 251 lncRNA 0.40 2 49478939 49485923

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 1064805 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1520922 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2365877 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 3212017 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 107463 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 120176 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 125328 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 168769 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 194745 49680668 ~ 49772757 (+)
G1747831 NA non-coding upstream 21789 49456453 ~ 49457150 (+)
G1747818 NA non-coding upstream 29836 49448831 ~ 49449103 (+)
G1747816 NA non-coding upstream 30851 49447523 ~ 49448088 (+)
G1747802 NA non-coding upstream 42957 49435775 ~ 49435982 (+)
G1747780 NA non-coding upstream 61695 49417037 ~ 49417244 (+)
G1747832 NA non-coding downstream 77610 49563533 ~ 49581388 (+)
G1747905 NA non-coding downstream 178881 49664804 ~ 49665123 (+)
G1747966 NA non-coding downstream 182824 49668747 ~ 49668956 (+)
G1747975 NA non-coding downstream 189312 49675235 ~ 49675508 (+)
G1747977 NA non-coding downstream 190128 49676051 ~ 49676367 (+)
G1747814 LOC106606817 other upstream 32313 49445839 ~ 49446626 (+)
G1747255 NA other upstream 501181 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1115013 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1383820 48094767 ~ 48095119 (+)
G1744645 NA other upstream 2311285 47163904 ~ 47236823 (+)
LOC110500883 LOC106577571 other downstream 1112987 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1630522 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1648166 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1876763 51362686 ~ 51363380 (+)

Expression


Co-expression Network