G1747832


Basic Information

Item Value
gene id G1747832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49563533 ~ 49581388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001213
TGCTCTTTGATACACTTTATTATGTTGAGAGGTGCATTAACATTTTACTGTGGTGTTCGATTAATATAAAACTGTTGATGATCATCACTACATTTGTAACCTTCACAGTTCTATCCACAAGAGGGCGTCACAGCGCCTCCATTGTATTTCTCAATTCAGTGATATCAATCGTTTCAATGAACTCTTGGGCAGACTTCATTTTCATATCAAGCAAAAcagatataaaaataaaaaaaatcatgtcAATACTTTGATCCAGACATCCCTGAAATCTCATACAGATCATTTATATTAATACAAATCCCATATACCTTAAGTGAAGACAGTTAAAAAAGTAATCACTACATTTTACCAAAGCtttgtgtgtactgtattttTGTATGAACTCCCATAATATGTCGGCTATAACCATGTAAGATCATTATTTGTAAAAATCATATGGATATTAGATCAGTGAAAATATAGAATATAAAATGTCCTTGAGACAGTTAAAATCATTGCCTCTACCTACAAAAAGTCAAAAGCATTACAATAGTTCATATTTCATCAGTTCAAATGACAGTTTACATTTCAAAATCATGAGCTGAGATCTCTCTGAATCACGTTTTTGAGACCAGGCCTTGAATTCCAGCTCTGTTTCTTGGCCAACATGTAGACGCATCCAAAGAGATCAGGGAACATCTTCATCAGGTCAACCAATTCTAAATCCTCAGCACTGCAGAAGGAGAAACAAACTCAGCCACCTTCAAATGGTAAGACAGTGAAACGTTTTAGTACGGGGGAAAACAGTCTTACGTACTAGTGCTCATGGAGGTTGCGTATGAAGCGTAGTAACCCCAACATGTTCTCAGGGTAGGGCTGTTTGCCATCCATCTTTATCGTCAATTCAGAGGACAGCTGTGATCACAAAACAATCTGTAAATTGTGTAGCCTCTGAGCTTTCTACACTCTGCCAGGGGAGAGGGTATTCACGCTTTTAATACACATGTACATACATTTAATAAAATGACAACTGGTTCACCTTGGATCTCCACTGACAGGTTGTCTCCGTAGCACTTTTAGAAGCTCTTGGGCAGCATCACGACACTTCCCAACCTCTCATTCCCAACTCTCCTGGAAAACAACAATGTACAGTAGAAGTGTCTAGTCATACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001213 True 1154 lncRNA 0.38 2 49563533 49581388

Neighbor

gene id symbol gene type direction distance location
LOC110500610 LOC106608613 coding upstream 1149399 48382854 ~ 48414134 (+)
LOC110500605 LOC106608606 coding upstream 1605516 47368664 ~ 47958017 (+)
LOC110500876 LOC106577625 coding upstream 2450471 47034102 ~ 47113062 (+)
LOC110500597 LOC106608784 coding upstream 3296611 46216617 ~ 46266922 (+)
LOC110500624 LOC106608622 coding downstream 11998 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 24711 49606099 ~ 49609714 (+)
aco1 aco1 coding downstream 29863 49611251 ~ 49623432 (+)
LOC110500627 LOC106608625 coding downstream 73304 49654692 ~ 49662658 (+)
LOC110500628 LOC106608626 coding downstream 99280 49680668 ~ 49772757 (+)
G1747842 NA non-coding upstream 77610 49478939 ~ 49485923 (+)
G1747831 NA non-coding upstream 106383 49456453 ~ 49457150 (+)
G1747818 NA non-coding upstream 114430 49448831 ~ 49449103 (+)
G1747816 NA non-coding upstream 115445 49447523 ~ 49448088 (+)
G1747802 NA non-coding upstream 127551 49435775 ~ 49435982 (+)
G1747905 NA non-coding downstream 83416 49664804 ~ 49665123 (+)
G1747966 NA non-coding downstream 87359 49668747 ~ 49668956 (+)
G1747975 NA non-coding downstream 93847 49675235 ~ 49675508 (+)
G1747977 NA non-coding downstream 94663 49676051 ~ 49676367 (+)
G1748021 NA non-coding downstream 177702 49759090 ~ 49759342 (+)
G1747814 LOC106606817 other upstream 116907 49445839 ~ 49446626 (+)
G1747255 NA other upstream 585775 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1199607 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1468414 48094767 ~ 48095119 (+)
G1744645 NA other upstream 2395879 47163904 ~ 47236823 (+)
LOC110500883 LOC106577571 other downstream 1017522 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1535057 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1552701 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1781298 51362686 ~ 51363380 (+)

Expression


Co-expression Network