G1747966


Basic Information

Item Value
gene id G1747966
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49668747 ~ 49668956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001398
TCCCCCCTCACAACTCTAGCAGCTGTAGCAGAACCACTTTCTGGACTGGTCAGTGAAGGGATTGATTTGGCCTATTGATTTTCACATTAGATGTCATTGTAGTTGAAAAAAAGAGTGTACTAATCCAATTAAAGCTGGATCTCCAAACAGTTAAGTCTAATCCAGTCAAGACTACGAAATCTATCGATTTTTCGTTCCAAATCAATAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001398 True 210 lncRNA 0.39 1 49668747 49668956

Neighbor

gene id symbol gene type direction distance location
LOC110500627 LOC106608625 coding upstream 6089 49654692 ~ 49662658 (+)
aco1 aco1 coding upstream 45315 49611251 ~ 49623432 (+)
LOC110500625 cj011 coding upstream 59033 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 62870 49593386 ~ 49605877 (+)
LOC110500610 LOC106608613 coding upstream 1254613 48382854 ~ 48414134 (+)
LOC110500628 LOC106608626 coding downstream 11712 49680668 ~ 49772757 (+)
LOC110500629 LOC106608629 coding downstream 221631 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 366598 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 384932 50053888 ~ 50056399 (+)
LOC110500633 LOC100694115 coding downstream 412598 50081554 ~ 50083324 (+)
G1747905 NA non-coding upstream 3624 49664804 ~ 49665123 (+)
G1747830 NA non-coding upstream 83575 49459688 ~ 49585172 (+)
G1747833 LOC106608620 non-coding upstream 83985 49458248 ~ 49584762 (+)
G1747832 NA non-coding upstream 87359 49563533 ~ 49581388 (+)
G1747842 NA non-coding upstream 182824 49478939 ~ 49485923 (+)
G1747975 NA non-coding downstream 6279 49675235 ~ 49675508 (+)
G1747977 NA non-coding downstream 7095 49676051 ~ 49676367 (+)
G1748021 NA non-coding downstream 90134 49759090 ~ 49759342 (+)
G1748026 NA non-coding downstream 99055 49768011 ~ 49768407 (+)
G1747972 NA non-coding downstream 104537 49773493 ~ 49776111 (+)
G1747814 LOC106606817 other upstream 222121 49445839 ~ 49446626 (+)
G1747255 NA other upstream 690989 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1304821 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1573628 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 929954 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1447489 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1465133 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1693730 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1750013 51418969 ~ 51450475 (+)

Expression


Co-expression Network