G1747977


Basic Information

Item Value
gene id G1747977
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49676051 ~ 49676367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001409
TGGTTAAGGGGAGGGGAAGCTGACCCTAGATCTATATCTAGGAGAAACTTCTCTCCAGAGCAAAGGAATTTACATCTGTGGTTTGACAAACTTTTATTCAACTAAAGCTCATTTGTACAGCTTGTTTTGTGTCTTGGTCTAGGACAATAGGGGATCAATTCTGAGGTCCAGTTTATTTAGAAATCTATTCCTAACAGTGTCAAACCTCACAATGGGATACAGAACACAGCCTGCTTTAGCCTGAATTGTGTCATTGCACATAGTGGGTTTCTGCACTGTGCTTTCATGTCTGTTTGATGTTGACACTTGAATTAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001409 True 317 lncRNA 0.40 1 49676051 49676367

Neighbor

gene id symbol gene type direction distance location
LOC110500627 LOC106608625 coding upstream 13393 49654692 ~ 49662658 (+)
aco1 aco1 coding upstream 52619 49611251 ~ 49623432 (+)
LOC110500625 cj011 coding upstream 66337 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 70174 49593386 ~ 49605877 (+)
LOC110500610 LOC106608613 coding upstream 1261917 48382854 ~ 48414134 (+)
LOC110500628 LOC106608626 coding downstream 4301 49680668 ~ 49772757 (+)
LOC110500629 LOC106608629 coding downstream 214220 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 359187 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 377521 50053888 ~ 50056399 (+)
LOC110500633 LOC100694115 coding downstream 405187 50081554 ~ 50083324 (+)
G1747975 NA non-coding upstream 543 49675235 ~ 49675508 (+)
G1747966 NA non-coding upstream 7095 49668747 ~ 49668956 (+)
G1747905 NA non-coding upstream 10928 49664804 ~ 49665123 (+)
G1747830 NA non-coding upstream 90879 49459688 ~ 49585172 (+)
G1748021 NA non-coding downstream 82723 49759090 ~ 49759342 (+)
G1748026 NA non-coding downstream 91644 49768011 ~ 49768407 (+)
G1747972 NA non-coding downstream 97126 49773493 ~ 49776111 (+)
G1748110 NA non-coding downstream 108199 49784566 ~ 49785100 (+)
G1748114 NA non-coding downstream 111524 49787891 ~ 49788146 (+)
G1747814 LOC106606817 other upstream 229425 49445839 ~ 49446626 (+)
G1747255 NA other upstream 698293 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1312125 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1580932 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 922543 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1440078 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1457722 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1686319 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1742602 51418969 ~ 51450475 (+)

Expression


Co-expression Network