G1748021


Basic Information

Item Value
gene id G1748021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49759090 ~ 49759342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001458
TCAGTATGTAGCTGTAGAGATGCAGTCACCGGTGATATTTCAGTATGTAGCTGTAGAGATGCAGTCACTGGTGATATTTCAGTATGTAGCTGTAGAGATGCAGTCACTGGTGATATTTCAGTATGTAGCTATAGAGATGCAGTCACCGGGTTATATTTCAGGATGCAGCTGTAGAGATGCAGTCACCGGGTTATATTTCAGTATGTAGCTGTAGAGATGCCGTCACTGGTTATATTTCAGTATGTAGCTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001458 True 253 lncRNA 0.42 1 49759090 49759342

Neighbor

gene id symbol gene type direction distance location
LOC110500627 LOC106608625 coding upstream 96432 49654692 ~ 49662658 (+)
aco1 aco1 coding upstream 135658 49611251 ~ 49623432 (+)
LOC110500625 cj011 coding upstream 149376 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 153213 49593386 ~ 49605877 (+)
LOC110500610 LOC106608613 coding upstream 1344956 48382854 ~ 48414134 (+)
LOC110500629 LOC106608629 coding downstream 131245 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 276212 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 294546 50053888 ~ 50056399 (+)
LOC110500633 LOC100694115 coding downstream 322212 50081554 ~ 50083324 (+)
LOC110500635 LOC106608610 coding downstream 457809 50217151 ~ 50224340 (+)
G1747977 NA non-coding upstream 82723 49676051 ~ 49676367 (+)
G1747975 NA non-coding upstream 83582 49675235 ~ 49675508 (+)
G1747966 NA non-coding upstream 90134 49668747 ~ 49668956 (+)
G1747905 NA non-coding upstream 93967 49664804 ~ 49665123 (+)
G1747832 NA non-coding upstream 177702 49563533 ~ 49581388 (+)
G1748026 NA non-coding downstream 8669 49768011 ~ 49768407 (+)
G1747972 NA non-coding downstream 14151 49773493 ~ 49776111 (+)
G1748110 NA non-coding downstream 25224 49784566 ~ 49785100 (+)
G1748114 NA non-coding downstream 28549 49787891 ~ 49788146 (+)
G1748118 NA non-coding downstream 30320 49789662 ~ 49789934 (+)
G1747814 LOC106606817 other upstream 312464 49445839 ~ 49446626 (+)
G1747255 NA other upstream 781332 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1395164 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1663971 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 839568 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1357103 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1374747 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1603344 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1659627 51418969 ~ 51450475 (+)

Expression


Co-expression Network