G1748140


Basic Information

Item Value
gene id G1748140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49805345 ~ 49805662 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001615
actaccctctgtagtgccttgcggtcggagaccgcgcagttgccataccaggcagtgatgctctcgatggtgcagatgtagaaccttttgaggatctgaggacccataccaaactttttcagtctcctgagggggaataggttttgttgtgccctcttcatgactttcttggtgtgcttggaccatgttagtttgttggtgatgtggacaccaaggaacttgaagctcccaacctgctccactacagccccgtctatgagattgggggcgtgctcggtctacctttccctgtagtccacaatcatatccttagtcttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001615 True 318 lncRNA 0.51 1 49805345 49805662

Neighbor

gene id symbol gene type direction distance location
LOC110500628 LOC106608626 coding upstream 32588 49680668 ~ 49772757 (+)
LOC110500627 LOC106608625 coding upstream 142687 49654692 ~ 49662658 (+)
aco1 aco1 coding upstream 181913 49611251 ~ 49623432 (+)
LOC110500625 cj011 coding upstream 195631 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 199468 49593386 ~ 49605877 (+)
LOC110500629 LOC106608629 coding downstream 84925 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 229892 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 248226 50053888 ~ 50056399 (+)
LOC110500633 LOC100694115 coding downstream 275892 50081554 ~ 50083324 (+)
LOC110500635 LOC106608610 coding downstream 411489 50217151 ~ 50224340 (+)
G1748132 NA non-coding upstream 5469 49799589 ~ 49799876 (+)
G1748121 NA non-coding upstream 13427 49791679 ~ 49791918 (+)
G1748118 NA non-coding upstream 15411 49789662 ~ 49789934 (+)
G1748114 NA non-coding upstream 17199 49787891 ~ 49788146 (+)
G1748110 NA non-coding upstream 20245 49784566 ~ 49785100 (+)
G1748173 NA non-coding downstream 23462 49829124 ~ 49829373 (+)
G1748176 NA non-coding downstream 24996 49830658 ~ 49830862 (+)
G1748177 NA non-coding downstream 26247 49831909 ~ 49832112 (+)
G1748178 NA non-coding downstream 26736 49832398 ~ 49832597 (+)
G1748182 NA non-coding downstream 30582 49836244 ~ 49836561 (+)
G1747814 LOC106606817 other upstream 358719 49445839 ~ 49446626 (+)
G1747255 NA other upstream 827587 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1441419 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1710226 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 793248 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1310783 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1328427 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1557024 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1613307 51418969 ~ 51450475 (+)

Expression


Co-expression Network