G1748215


Basic Information

Item Value
gene id G1748215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49869523 ~ 49869822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001691
CCTTTTTACTTAAATTACCTGAAATGTGTCATTCTAGGCTACATAAAAATAACGGTATTATGTTACATGATGATTGAAAATTTGAttaaactgagtgtacaaaacattaagaacacgttcctaatattgagttgcgagGAAAGGAAACATCCATTCTTGCCTGTGCGTAACAATTCTGCAAAAACATGGCCGCCAGCAGTTTACGGAATTCCGGGTATTCCCAAGGAAGTGACCTCTGTTGGACACCCATGCCCTGctcttcctcagtctctcctGTCAGTTTTCCTAAAAGTCAAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001691 True 300 lncRNA 0.40 1 49869523 49869822

Neighbor

gene id symbol gene type direction distance location
LOC110500628 LOC106608626 coding upstream 96766 49680668 ~ 49772757 (+)
LOC110500627 LOC106608625 coding upstream 206865 49654692 ~ 49662658 (+)
aco1 aco1 coding upstream 246091 49611251 ~ 49623432 (+)
LOC110500625 cj011 coding upstream 259809 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 263646 49593386 ~ 49605877 (+)
LOC110500629 LOC106608629 coding downstream 20765 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 165732 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 184066 50053888 ~ 50056399 (+)
LOC110500633 LOC100694115 coding downstream 211732 50081554 ~ 50083324 (+)
LOC110500635 LOC106608610 coding downstream 347329 50217151 ~ 50224340 (+)
G1748213 NA non-coding upstream 409 49868874 ~ 49869114 (+)
G1748209 NA non-coding upstream 2626 49866667 ~ 49866897 (+)
G1748204 NA non-coding upstream 5331 49863914 ~ 49864192 (+)
G1748196 NA non-coding upstream 19183 49850080 ~ 49850340 (+)
G1748192 NA non-coding upstream 23584 49845672 ~ 49845939 (+)
G1748216 NA non-coding downstream 63 49869885 ~ 49870177 (+)
G1748228 NA non-coding downstream 8537 49878359 ~ 49878607 (+)
G1748230 NA non-coding downstream 9155 49878977 ~ 49879241 (+)
G1748232 NA non-coding downstream 9497 49879319 ~ 49879679 (+)
G1748233 NA non-coding downstream 9982 49879804 ~ 49880087 (+)
G1747814 LOC106606817 other upstream 422897 49445839 ~ 49446626 (+)
G1747255 NA other upstream 891765 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1505597 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1774404 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 729088 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1246623 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1264267 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1492864 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1549147 51418969 ~ 51450475 (+)

Expression


Co-expression Network