G1748216


Basic Information

Item Value
gene id G1748216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49869885 ~ 49870177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001692
CTCTCGCAATTAGCGGCATTGCCAGAGGATAAATACATTCTGAGCAGCTGTCAAGTGTCTAAGTCTCCCACTGGGGAATCCGCTGCTCTTTGGAGATATGAAGAAAAGCAGCTAGGCTCCTGGAGGGAAACTGTTTTTTGACAAGACTAGTGTTGGTAGACAAGGATAAAGGCTAGGATAGGTAGAGGGCAAGGCTGTTTCCTCTTACTTATACAGTTCAGAAGAGGATGGACATGTACAGTTTCAATGAACCACTACTATGTTGGTGTACTGTAATTTTATCACTGTTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001692 True 293 lncRNA 0.43 1 49869885 49870177

Neighbor

gene id symbol gene type direction distance location
LOC110500628 LOC106608626 coding upstream 97128 49680668 ~ 49772757 (+)
LOC110500627 LOC106608625 coding upstream 207227 49654692 ~ 49662658 (+)
aco1 aco1 coding upstream 246453 49611251 ~ 49623432 (+)
LOC110500625 cj011 coding upstream 260171 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 264008 49593386 ~ 49605877 (+)
LOC110500629 LOC106608629 coding downstream 20410 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 165377 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 183711 50053888 ~ 50056399 (+)
LOC110500633 LOC100694115 coding downstream 211377 50081554 ~ 50083324 (+)
LOC110500635 LOC106608610 coding downstream 346974 50217151 ~ 50224340 (+)
G1748215 NA non-coding upstream 63 49869523 ~ 49869822 (+)
G1748213 NA non-coding upstream 771 49868874 ~ 49869114 (+)
G1748209 NA non-coding upstream 2988 49866667 ~ 49866897 (+)
G1748204 NA non-coding upstream 5693 49863914 ~ 49864192 (+)
G1748196 NA non-coding upstream 19545 49850080 ~ 49850340 (+)
G1748228 NA non-coding downstream 8182 49878359 ~ 49878607 (+)
G1748230 NA non-coding downstream 8800 49878977 ~ 49879241 (+)
G1748232 NA non-coding downstream 9142 49879319 ~ 49879679 (+)
G1748233 NA non-coding downstream 9627 49879804 ~ 49880087 (+)
G1748236 NA non-coding downstream 10726 49880903 ~ 49881127 (+)
G1747814 LOC106606817 other upstream 423259 49445839 ~ 49446626 (+)
G1747255 NA other upstream 892127 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1505959 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1774766 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 728733 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1246268 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1263912 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1492509 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1548792 51418969 ~ 51450475 (+)

Expression


Co-expression Network