G1748232


Basic Information

Item Value
gene id G1748232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 49879319 ~ 49879679 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001709
gccatagatttacattagaagtacccatccaagaaggctcaatgccattggccacagataagatgtcaaatcatgttatactgtatctaccatagctttgattgTACTGATCATGTCAATACTTataaaatcttagctagcaagctagacaagcagtcgtTGTCATGAATCatgttgacaatctactggcaaatccttttcaatccttgtcatatgaagagaaactATAGATAAAACGATCGGTGCCCATcggccataaacattacacaaattcaacaatgagtggttagGAAGGAATCAATGGCTAACTGCAAGTGTCGCAAAGCAATTAATATTTTGCTTTACCTGCCTACTATTCAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594773

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001709 True 361 lncRNA 0.38 1 49879319 49879679

Neighbor

gene id symbol gene type direction distance location
LOC110500628 LOC106608626 coding upstream 106562 49680668 ~ 49772757 (+)
LOC110500627 LOC106608625 coding upstream 216661 49654692 ~ 49662658 (+)
aco1 aco1 coding upstream 255887 49611251 ~ 49623432 (+)
LOC110500625 cj011 coding upstream 269605 49606099 ~ 49609714 (+)
LOC110500624 LOC106608622 coding upstream 273442 49593386 ~ 49605877 (+)
LOC110500629 LOC106608629 coding downstream 10908 49890587 ~ 50027397 (+)
LOC110500631 NA coding downstream 155875 50035554 ~ 50043842 (+)
LOC110500632 ddit4l coding downstream 174209 50053888 ~ 50056399 (+)
LOC110500633 LOC100694115 coding downstream 201875 50081554 ~ 50083324 (+)
LOC110500635 LOC106608610 coding downstream 337472 50217151 ~ 50224340 (+)
G1748230 NA non-coding upstream 78 49878977 ~ 49879241 (+)
G1748228 NA non-coding upstream 712 49878359 ~ 49878607 (+)
G1748216 NA non-coding upstream 9142 49869885 ~ 49870177 (+)
G1748215 NA non-coding upstream 9497 49869523 ~ 49869822 (+)
G1748213 NA non-coding upstream 10205 49868874 ~ 49869114 (+)
G1748233 NA non-coding downstream 125 49879804 ~ 49880087 (+)
G1748236 NA non-coding downstream 1224 49880903 ~ 49881127 (+)
G1748237 NA non-coding downstream 1667 49881346 ~ 49881634 (+)
G1748286 NA non-coding downstream 47812 49927491 ~ 49954438 (+)
G1748450 NA non-coding downstream 302050 50181729 ~ 50181990 (+)
G1747814 LOC106606817 other upstream 432693 49445839 ~ 49446626 (+)
G1747255 NA other upstream 901561 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1515393 48325100 ~ 48363926 (+)
G1746210 NA other upstream 1784200 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 719231 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 1236766 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 1254410 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1483007 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1539290 51418969 ~ 51450475 (+)

Expression


Co-expression Network