G1748450


Basic Information

Item Value
gene id G1748450
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50181729 ~ 50181990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001955
ataacagcctccactcttctgggaaggctttccactagatgttggaacattgctgtggggacttgcttccattcagccacaagagcattagtgaggtcggggactaatgttgggcgattaggcctggctctcagtcggcgttccaattcatcccaaaggtgttcgatggggttgaggtcagggctctgtgcaggccactcAAGTTCTTCCCACCGATCTCGACTAACCACTTCTGTATGGAcattgctttgtgcacgggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001955 True 262 lncRNA 0.53 1 50181729 50181990

Neighbor

gene id symbol gene type direction distance location
LOC110500633 LOC100694115 coding upstream 98405 50081554 ~ 50083324 (+)
LOC110500632 ddit4l coding upstream 125330 50053888 ~ 50056399 (+)
LOC110500631 NA coding upstream 137887 50035554 ~ 50043842 (+)
LOC110500629 LOC106608629 coding upstream 154332 49890587 ~ 50027397 (+)
LOC110500628 LOC106608626 coding upstream 408972 49680668 ~ 49772757 (+)
LOC110500635 LOC106608610 coding downstream 35161 50217151 ~ 50224340 (+)
LOC110500637 LOC106608635 coding downstream 48216 50230206 ~ 50239928 (+)
LOC110500640 LOC106608639 coding downstream 75683 50257673 ~ 50263754 (+)
spata6l LOC106608638 coding downstream 81921 50263911 ~ 50270551 (+)
LOC110500641 LOC106608640 coding downstream 115070 50297060 ~ 50355717 (+)
G1748286 NA non-coding upstream 227291 49927491 ~ 49954438 (+)
G1748237 NA non-coding upstream 300095 49881346 ~ 49881634 (+)
G1748236 NA non-coding upstream 300602 49880903 ~ 49881127 (+)
G1748233 NA non-coding upstream 301642 49879804 ~ 49880087 (+)
G1748232 NA non-coding upstream 302050 49879319 ~ 49879679 (+)
G1748462 NA non-coding downstream 17356 50199346 ~ 50199546 (+)
G1748480 NA non-coding downstream 47321 50229311 ~ 50229775 (+)
G1748484 NA non-coding downstream 62590 50244580 ~ 50247205 (+)
G1748486 LOC106608637 non-coding downstream 65466 50247456 ~ 50252566 (+)
G1748499 NA non-coding downstream 94726 50276716 ~ 50277372 (+)
LOC110500625 cj011 other upstream 572149 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 735103 49445839 ~ 49446626 (+)
G1747255 NA other upstream 1203971 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1817803 48325100 ~ 48363926 (+)
G1746210 NA other upstream 2086610 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 416920 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 934455 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 952099 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1180696 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1236979 51418969 ~ 51450475 (+)

Expression


Co-expression Network