G1748462


Basic Information

Item Value
gene id G1748462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50199346 ~ 50199546 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2001967
atttatcactccagtgttaatctgcaaaattgtaattattcgcctacctcctcatgccttttgcacacattgtatatagactcccccttttttttctactgtgttattgacttgttaattgtttactccatgtgtaactctgtgttgtctgctcatactgctatgctttatcttggccaggtcgcagttgcaaatgagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2001967 True 201 lncRNA 0.38 1 50199346 50199546

Neighbor

gene id symbol gene type direction distance location
LOC110500633 LOC100694115 coding upstream 116022 50081554 ~ 50083324 (+)
LOC110500632 ddit4l coding upstream 142947 50053888 ~ 50056399 (+)
LOC110500631 NA coding upstream 155504 50035554 ~ 50043842 (+)
LOC110500629 LOC106608629 coding upstream 171949 49890587 ~ 50027397 (+)
LOC110500628 LOC106608626 coding upstream 426589 49680668 ~ 49772757 (+)
LOC110500635 LOC106608610 coding downstream 17605 50217151 ~ 50224340 (+)
LOC110500637 LOC106608635 coding downstream 30660 50230206 ~ 50239928 (+)
LOC110500640 LOC106608639 coding downstream 58127 50257673 ~ 50263754 (+)
spata6l LOC106608638 coding downstream 64365 50263911 ~ 50270551 (+)
LOC110500641 LOC106608640 coding downstream 97514 50297060 ~ 50355717 (+)
G1748450 NA non-coding upstream 17356 50181729 ~ 50181990 (+)
G1748286 NA non-coding upstream 244908 49927491 ~ 49954438 (+)
G1748237 NA non-coding upstream 317712 49881346 ~ 49881634 (+)
G1748236 NA non-coding upstream 318219 49880903 ~ 49881127 (+)
G1748233 NA non-coding upstream 319259 49879804 ~ 49880087 (+)
G1748480 NA non-coding downstream 29765 50229311 ~ 50229775 (+)
G1748484 NA non-coding downstream 45034 50244580 ~ 50247205 (+)
G1748486 LOC106608637 non-coding downstream 47910 50247456 ~ 50252566 (+)
G1748499 NA non-coding downstream 77170 50276716 ~ 50277372 (+)
G1748517 NA non-coding downstream 157829 50357375 ~ 50358092 (+)
LOC110500625 cj011 other upstream 589766 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 752720 49445839 ~ 49446626 (+)
G1747255 NA other upstream 1221588 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 1835420 48325100 ~ 48363926 (+)
G1746210 NA other upstream 2104227 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 399364 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 916899 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 934543 51134089 ~ 51142008 (+)
G1749651 NA other downstream 1163140 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1219423 51418969 ~ 51450475 (+)

Expression


Co-expression Network