Gene
RNA
| Item | Value |
|---|---|
| gene id | G1748480 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 50229311 ~ 50229775 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2001986 | True | 465 | lncRNA | 0.40 | 1 | 50229311 | 50229775 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500635 | LOC106608610 | coding | upstream | 4971 | 50217151 ~ 50224340 (+) |
| LOC110500633 | LOC100694115 | coding | upstream | 145987 | 50081554 ~ 50083324 (+) |
| LOC110500632 | ddit4l | coding | upstream | 172912 | 50053888 ~ 50056399 (+) |
| LOC110500631 | NA | coding | upstream | 185469 | 50035554 ~ 50043842 (+) |
| LOC110500629 | LOC106608629 | coding | upstream | 201914 | 49890587 ~ 50027397 (+) |
| LOC110500637 | LOC106608635 | coding | downstream | 431 | 50230206 ~ 50239928 (+) |
| LOC110500640 | LOC106608639 | coding | downstream | 27898 | 50257673 ~ 50263754 (+) |
| spata6l | LOC106608638 | coding | downstream | 34136 | 50263911 ~ 50270551 (+) |
| LOC110500641 | LOC106608640 | coding | downstream | 67285 | 50297060 ~ 50355717 (+) |
| LOC110500645 | LOC106608645 | coding | downstream | 252067 | 50481842 ~ 50486101 (+) |
| G1748462 | NA | non-coding | upstream | 29765 | 50199346 ~ 50199546 (+) |
| G1748450 | NA | non-coding | upstream | 47321 | 50181729 ~ 50181990 (+) |
| G1748286 | NA | non-coding | upstream | 274873 | 49927491 ~ 49954438 (+) |
| G1748237 | NA | non-coding | upstream | 347677 | 49881346 ~ 49881634 (+) |
| G1748236 | NA | non-coding | upstream | 348184 | 49880903 ~ 49881127 (+) |
| G1748484 | NA | non-coding | downstream | 14805 | 50244580 ~ 50247205 (+) |
| G1748486 | LOC106608637 | non-coding | downstream | 17681 | 50247456 ~ 50252566 (+) |
| G1748499 | NA | non-coding | downstream | 46941 | 50276716 ~ 50277372 (+) |
| G1748517 | NA | non-coding | downstream | 127600 | 50357375 ~ 50358092 (+) |
| G1748560 | NA | non-coding | downstream | 145832 | 50375607 ~ 50415360 (+) |
| LOC110500625 | cj011 | other | upstream | 619731 | 49606099 ~ 49609714 (+) |
| G1747814 | LOC106606817 | other | upstream | 782685 | 49445839 ~ 49446626 (+) |
| G1747255 | NA | other | upstream | 1251553 | 48977326 ~ 48977758 (+) |
| G1746471 | LOC106608612 | other | upstream | 1865385 | 48325100 ~ 48363926 (+) |
| G1746210 | NA | other | upstream | 2134192 | 48094767 ~ 48095119 (+) |
| LOC110500883 | LOC106577571 | other | downstream | 369135 | 50598799 ~ 50615280 (+) |
| LOC110500674 | dulda | other | downstream | 886670 | 51116362 ~ 51133346 (+) |
| gbrap | gbrap | other | downstream | 904314 | 51134089 ~ 51142008 (+) |
| G1749651 | NA | other | downstream | 1132911 | 51362686 ~ 51363380 (+) |
| G1749650 | NA | other | downstream | 1189194 | 51418969 ~ 51450475 (+) |
