G1748578


Basic Information

Item Value
gene id G1748578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50402621 ~ 50407729 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2002100
AAGAATTGACCCATTTAAAAATAATTTCAACAAGAAGTTACCAGTTTTTATGTCGAGTCATTTCAGTCTATATACCAGAGAGCTACCAATGGTAATGGGGATGTAAAATAGTGTTaaCTATTGTTTTCTCCCCAGCGGATGCGGCAGACCAGCTGGGGACCAATTCCAAGCTTGTGGAGCGTCTGGTAGAGTGGTGTGAGGCCAAGGACCATGCAGGAGTCATGGGAGAGTCCAACAGACTGCTCTCAGCTCTCATCCGCCACAGCAAATCAAAGGTTAGGGCCAGCTGCCATGGAAACACACACCATCTgtgactgactagctggctggctgtgACCACAGAATACATTCTGACCCATAATGGAACTGTTGAGATCAAGGGGAACAACGGACTGTGATTCATTGTCTAACTCTTCCTGAAATAGAATCTTTCTTGTGGGATAATGCCTAGACCTAGCGATGGCAGTTCTGCTTACACTTCCCATCCAGTCTCATCTCAGGGGAGAATGACTCCGGTG

Function

NR:

description
PREDICTED: rap1 GTPase-GDP dissociation stimulator 1-B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2002100 True 518 lncRNA 0.47 2 50402621 50407729

Neighbor

gene id symbol gene type direction distance location
LOC110500641 LOC106608640 coding upstream 46904 50297060 ~ 50355717 (+)
spata6l LOC106608638 coding upstream 132070 50263911 ~ 50270551 (+)
LOC110500640 LOC106608639 coding upstream 138867 50257673 ~ 50263754 (+)
LOC110500637 LOC106608635 coding upstream 162693 50230206 ~ 50239928 (+)
LOC110500635 LOC106608610 coding upstream 178281 50217151 ~ 50224340 (+)
LOC110500645 LOC106608645 coding downstream 74113 50481842 ~ 50486101 (+)
LOC110500647 NA coding downstream 81399 50489128 ~ 50494517 (+)
LOC110500651 LOC106608649 coding downstream 97509 50505238 ~ 50508101 (+)
LOC110500882 NA coding downstream 111289 50519018 ~ 50530191 (+)
LOC110500656 LOC106608653 coding downstream 155172 50562901 ~ 50578867 (+)
G1748517 NA non-coding upstream 44529 50357375 ~ 50358092 (+)
G1748499 NA non-coding upstream 125249 50276716 ~ 50277372 (+)
G1748486 LOC106608637 non-coding upstream 150055 50247456 ~ 50252566 (+)
G1748484 NA non-coding upstream 155416 50244580 ~ 50247205 (+)
G1748480 NA non-coding upstream 172846 50229311 ~ 50229775 (+)
G1748657 NA non-coding downstream 126280 50534009 ~ 50536926 (+)
G1748679 NA non-coding downstream 161535 50569264 ~ 50570060 (+)
G1748685 NA non-coding downstream 179413 50587142 ~ 50587464 (+)
LOC110500658 LOC106608695 non-coding downstream 184363 50592046 ~ 50598188 (+)
G1748703 NA non-coding downstream 209698 50617427 ~ 50617656 (+)
LOC110500625 cj011 other upstream 793041 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 955995 49445839 ~ 49446626 (+)
G1747255 NA other upstream 1424863 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 2038695 48325100 ~ 48363926 (+)
G1746210 NA other upstream 2307502 48094767 ~ 48095119 (+)
LOC110500883 LOC106577571 other downstream 191181 50598799 ~ 50615280 (+)
LOC110500674 dulda other downstream 708716 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 726360 51134089 ~ 51142008 (+)
G1749651 NA other downstream 954957 51362686 ~ 51363380 (+)
G1749650 NA other downstream 1011240 51418969 ~ 51450475 (+)

Expression


Co-expression Network