G1748706


Basic Information

Item Value
gene id G1748706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50620786 ~ 50621017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2002265
ACCGAAAGGACTCCCATTGTCTTGGATAATTAGAATACACTGACTCCCCCCCTGAATGTACTCTACAACTACCAATACATTCCCATTTCAATACAATTGTTCCCCCTGCACTTTCATATCATTTGCATATCATTTAATTGTGCATTGAGAATAGTATCCACACACTGCCAAGTATGCTGCTTTTGATAAAAAATGTAGGTGTCTTTTCCTCAAGTGAAGAGTAATATACTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2002265 True 232 lncRNA 0.38 1 50620786 50621017

Neighbor

gene id symbol gene type direction distance location
LOC110500883 LOC106577571 coding upstream 5506 50598799 ~ 50615280 (+)
trnaa-cgc-5 NA coding upstream 22172 50598543 ~ 50598614 (+)
LOC110500658 LOC106608695 coding upstream 22598 50592046 ~ 50598188 (+)
LOC110500656 LOC106608653 coding upstream 41919 50562901 ~ 50578867 (+)
LOC110500882 NA coding upstream 90595 50519018 ~ 50530191 (+)
msantd1 LOC106608655 coding downstream 266 50621283 ~ 50624034 (+)
LOC110500660 LOC106608656 coding downstream 8395 50629412 ~ 50707579 (+)
LOC110500661 hgfa coding downstream 90479 50711496 ~ 50732973 (+)
LOC110500662 LOC106608658 coding downstream 113706 50734723 ~ 50767433 (+)
LOC110500663 LOC106608696 coding downstream 221392 50842409 ~ 50844632 (+)
G1748704 NA non-coding upstream 2012 50618286 ~ 50618774 (+)
G1748703 NA non-coding upstream 3130 50617427 ~ 50617656 (+)
G1748685 NA non-coding upstream 33322 50587142 ~ 50587464 (+)
G1748679 NA non-coding upstream 50726 50569264 ~ 50570060 (+)
G1748728 NA non-coding downstream 89913 50710930 ~ 50711195 (+)
G1748735 NA non-coding downstream 148705 50769722 ~ 50770727 (+)
G1749267 NA non-coding downstream 155358 50776375 ~ 50776590 (+)
G1749270 NA non-coding downstream 204795 50825812 ~ 50912133 (+)
G1749434 LOC106608661 non-coding downstream 361231 50982248 ~ 50986719 (+)
LOC110500625 cj011 other upstream 1011206 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1174160 49445839 ~ 49446626 (+)
G1747255 NA other upstream 1643028 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 2256860 48325100 ~ 48363926 (+)
LOC110500674 dulda other downstream 495428 51116362 ~ 51133346 (+)
gbrap gbrap other downstream 513072 51134089 ~ 51142008 (+)
G1749651 NA other downstream 741669 51362686 ~ 51363380 (+)
G1749650 NA other downstream 797952 51418969 ~ 51450475 (+)
G1750012 NA other downstream 1450583 52071600 ~ 52079002 (+)

Expression


Co-expression Network