G1749270


Basic Information

Item Value
gene id G1749270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 50825812 ~ 50912133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2002904
tgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaTGATggacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatgcaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaa

Function

NR:

description
PREDICTED: pre-rRNA-processing protein TSR1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2002904 True 331 lncRNA 0.44 2 50825812 50912133

Neighbor

gene id symbol gene type direction distance location
LOC110500662 LOC106608658 coding upstream 58379 50734723 ~ 50767433 (+)
LOC110500661 hgfa coding upstream 92839 50711496 ~ 50732973 (+)
LOC110500660 LOC106608656 coding upstream 118233 50629412 ~ 50707579 (+)
msantd1 LOC106608655 coding upstream 201778 50621283 ~ 50624034 (+)
LOC110500883 LOC106577571 coding upstream 210532 50598799 ~ 50615280 (+)
LOC110500669 LOC106608664 coding downstream 141253 51053386 ~ 51067912 (+)
LOC110500672 NA coding downstream 187867 51100000 ~ 51101654 (+)
elp5 elp5 coding downstream 195597 51107730 ~ 51110207 (+)
LOC110500674 dulda coding downstream 204229 51116362 ~ 51133346 (+)
gbrap gbrap coding downstream 222365 51134089 ~ 51142008 (+)
G1749267 NA non-coding upstream 49222 50776375 ~ 50776590 (+)
G1748735 NA non-coding upstream 55085 50769722 ~ 50770727 (+)
G1748728 NA non-coding upstream 114617 50710930 ~ 50711195 (+)
G1748706 NA non-coding upstream 204795 50620786 ~ 50621017 (+)
G1748704 NA non-coding upstream 207038 50618286 ~ 50618774 (+)
G1749434 LOC106608661 non-coding downstream 70115 50982248 ~ 50986719 (+)
G1749436 LOC106608661 non-coding downstream 78609 50990742 ~ 50993138 (+)
G1749470 NA non-coding downstream 123437 51035570 ~ 51036032 (+)
G1749486 NA non-coding downstream 143109 51055242 ~ 51055457 (+)
G1749498 NA non-coding downstream 173436 51085569 ~ 51085830 (+)
LOC110500625 cj011 other upstream 1216232 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1379186 49445839 ~ 49446626 (+)
G1747255 NA other upstream 1848054 48977326 ~ 48977758 (+)
G1746471 LOC106608612 other upstream 2461886 48325100 ~ 48363926 (+)
G1749651 NA other downstream 450553 51362686 ~ 51363380 (+)
G1749650 NA other downstream 506836 51418969 ~ 51450475 (+)
G1750012 NA other downstream 1159467 52071600 ~ 52079002 (+)

Expression


Co-expression Network