G1749521


Basic Information

Item Value
gene id G1749521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51142985 ~ 51143430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003187
tctggcagtccgacagacaaatctgggtttggtggatgctagGAAAACGCTATCTGTCCCAATGATTAATGCCAACTGTaagggaataatggtctggggctgtttttcatggttcgtacTAGGCCCCTTCGTTCCAGTAAagagaaatcttaatgctacagcatacaatgacattctagacgattctgtgcttccaactttgtggcaacagtttggggaaggtcctttgctgtttcagcatgacaatgcacctgtgcacaaagagaggtccatacaaaaatggtttgtctagatcagtgtggaagaacttgcctGTGAGGAATGAACACTGGAGAGCCCCTTGAAGGAATGGAAATGACTACTATGAACAACCTGTAtatacattattaaaataaatgaCTTTAATGAGTTATTCACCATTAGAGTCTAAATCATCTATACCAGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003187 True 446 lncRNA 0.42 1 51142985 51143430

Neighbor

gene id symbol gene type direction distance location
gbrap gbrap coding upstream 1088 51134089 ~ 51142008 (+)
LOC110500674 dulda coding upstream 9639 51116362 ~ 51133346 (+)
elp5 elp5 coding upstream 32778 51107730 ~ 51110207 (+)
LOC110500672 NA coding upstream 41331 51100000 ~ 51101654 (+)
LOC110500669 LOC106608664 coding upstream 75073 51053386 ~ 51067912 (+)
LOC110500675 LOC106608669 coding downstream 1850 51145280 ~ 51153770 (+)
LOC110500677 LOC106608671 coding downstream 25886 51169316 ~ 51174187 (+)
LOC110500680 LOC106608673 coding downstream 58613 51202043 ~ 51216929 (+)
LOC110500679 LOC106608674 coding downstream 74554 51217984 ~ 51230820 (+)
LOC110500685 NA coding downstream 155449 51298879 ~ 51301196 (+)
G1749498 NA non-coding upstream 57155 51085569 ~ 51085830 (+)
G1749486 NA non-coding upstream 87528 51055242 ~ 51055457 (+)
G1749470 NA non-coding upstream 106953 51035570 ~ 51036032 (+)
G1749436 LOC106608661 non-coding upstream 149847 50990742 ~ 50993138 (+)
G1749434 LOC106608661 non-coding upstream 156266 50982248 ~ 50986719 (+)
G1749536 NA non-coding downstream 288 51143718 ~ 51144006 (+)
G1749540 NA non-coding downstream 22919 51166349 ~ 51166714 (+)
G1749567 NA non-coding downstream 57230 51200660 ~ 51200930 (+)
G1749580 NA non-coding downstream 95841 51239271 ~ 51239603 (+)
G1749582 NA non-coding downstream 97436 51240866 ~ 51241130 (+)
LOC110500883 LOC106577571 other upstream 539708 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1533405 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1696359 49445839 ~ 49446626 (+)
G1749651 NA other downstream 219256 51362686 ~ 51363380 (+)
G1749650 NA other downstream 275539 51418969 ~ 51450475 (+)
G1750012 NA other downstream 928170 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 951279 52094709 ~ 52095105 (+)
G1750050 NA other downstream 1047770 52191200 ~ 52197007 (+)

Expression


Co-expression Network