G1749540


Basic Information

Item Value
gene id G1749540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51166349 ~ 51166714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003206
GTGCGCGTTCACGCGAATGGGGGGAGAATTCTGGCAGGGGggagattttcggcacaacaccggCACTGATATCCTTATCTCACAGCTCCagtgttctgtaaacaccaggaAGTTACACACGATACAATAACACAAACGTTCCCTGTCCTTGGTCCTTTTACCTTCAGCAGTCTGACGCCAATATTATCAACCGATATGAACGTTGAGTCTAACATTCGAGTCTATGAGCCCCAGTTTAACACAAACATACACTGGCAGAATCATGTGTTTACCATCCGCGTCCTTCCGTTTGACGTCAATACTATGCATAATACTACTATGCATATGCAATTGAACGTAAACGCGACACATAAAACAATAACGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003206 True 366 lncRNA 0.45 1 51166349 51166714

Neighbor

gene id symbol gene type direction distance location
LOC110500675 LOC106608669 coding upstream 12579 51145280 ~ 51153770 (+)
gbrap gbrap coding upstream 24452 51134089 ~ 51142008 (+)
LOC110500674 dulda coding upstream 33003 51116362 ~ 51133346 (+)
elp5 elp5 coding upstream 56142 51107730 ~ 51110207 (+)
LOC110500672 NA coding upstream 64695 51100000 ~ 51101654 (+)
LOC110500677 LOC106608671 coding downstream 2602 51169316 ~ 51174187 (+)
LOC110500680 LOC106608673 coding downstream 35329 51202043 ~ 51216929 (+)
LOC110500679 LOC106608674 coding downstream 51270 51217984 ~ 51230820 (+)
LOC110500685 NA coding downstream 132165 51298879 ~ 51301196 (+)
LOC110500686 LOC106608678 coding downstream 150100 51316814 ~ 51332192 (+)
G1749536 NA non-coding upstream 22343 51143718 ~ 51144006 (+)
G1749521 NA non-coding upstream 22919 51142985 ~ 51143430 (+)
G1749498 NA non-coding upstream 80519 51085569 ~ 51085830 (+)
G1749486 NA non-coding upstream 110892 51055242 ~ 51055457 (+)
G1749470 NA non-coding upstream 130317 51035570 ~ 51036032 (+)
G1749567 NA non-coding downstream 33946 51200660 ~ 51200930 (+)
G1749580 NA non-coding downstream 72557 51239271 ~ 51239603 (+)
G1749582 NA non-coding downstream 74152 51240866 ~ 51241130 (+)
G1749584 NA non-coding downstream 76891 51243605 ~ 51246308 (+)
LOC110500883 LOC106577571 other upstream 563072 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1556769 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1719723 49445839 ~ 49446626 (+)
G1749651 NA other downstream 195972 51362686 ~ 51363380 (+)
G1749650 NA other downstream 252255 51418969 ~ 51450475 (+)
G1750012 NA other downstream 904886 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 927995 52094709 ~ 52095105 (+)
G1750050 NA other downstream 1024486 52191200 ~ 52197007 (+)

Expression


Co-expression Network