G1749640


Basic Information

Item Value
gene id G1749640
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51337668 ~ 51338090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003323
AATACAGTTAGCTGTTACTGTTGTACTACACCACCAAGTAATACAGTTAGCTGTTACTGTTGTACTACACCACCAAGTAATACAGTTAGCTGTTACTGTTGTACTACACCACCAAGTAATACAGTTAGCTGTTGCTGTTGTACTACACCACCAAGCAATACAGCTAGCTGTTGCTGTTGTACTACACCACCAAGTAATACAGTTAGCCGTTACTGTTGTACTACACCACCAAGCAATACAGTTAGCTGTTGCTGTTGTACTACACCACCAAGTAATACAGTTAGCTGTTACTGTTGTGTTTGTTGTACTACACCACCAAGCAATACAGCTAGCTGTTGCTGTTGTACTACACCACCAAGTAATACAGTTAGCCGTTACTGTTGTACTACACCACCAAGCAATACAGTTAGCTGTTACTGTTGT

Function

NR:

description
PREDICTED: rho guanine nucleotide exchange factor 3, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003323 True 423 lncRNA 0.41 1 51337668 51338090

Neighbor

gene id symbol gene type direction distance location
LOC110500686 LOC106608678 coding upstream 5476 51316814 ~ 51332192 (+)
LOC110500685 NA coding upstream 36472 51298879 ~ 51301196 (+)
LOC110500679 LOC106608674 coding upstream 106848 51217984 ~ 51230820 (+)
LOC110500680 LOC106608673 coding upstream 120739 51202043 ~ 51216929 (+)
LOC110500677 LOC106608671 coding upstream 163481 51169316 ~ 51174187 (+)
LOC110500687 LOC106608680 coding downstream 13223 51350884 ~ 51361534 (+)
LOC110500885 LOC106608683 coding downstream 32631 51370721 ~ 51413247 (+)
LOC110500691 LOC106608684 coding downstream 119138 51457228 ~ 51485888 (+)
LOC110500694 LOC106608686 coding downstream 163508 51501598 ~ 51507145 (+)
LOC110500695 LOC106608687 coding downstream 171193 51509283 ~ 51554830 (+)
G1749634 NA non-coding upstream 22856 51314321 ~ 51314812 (+)
G1749628 NA non-coding upstream 28020 51306141 ~ 51309648 (+)
G1749627 NA non-coding upstream 31634 51305813 ~ 51306034 (+)
G1749626 NA non-coding upstream 32051 51305359 ~ 51305617 (+)
G1749641 NA non-coding downstream 253 51338343 ~ 51338700 (+)
G1749642 NA non-coding downstream 1428 51339518 ~ 51339907 (+)
G1749644 NA non-coding downstream 3277 51341367 ~ 51341593 (+)
G1749646 NA non-coding downstream 4396 51342486 ~ 51343013 (+)
gbrap gbrap other upstream 195660 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 204330 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 734391 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1728088 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1891042 49445839 ~ 49446626 (+)
G1749651 NA other downstream 24596 51362686 ~ 51363380 (+)
G1749650 NA other downstream 80879 51418969 ~ 51450475 (+)
G1750012 NA other downstream 733510 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 756619 52094709 ~ 52095105 (+)
G1750050 NA other downstream 853110 52191200 ~ 52197007 (+)

Expression


Co-expression Network