G1749646


Basic Information

Item Value
gene id G1749646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51342486 ~ 51343013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003329
ccccccaaaggtgtggactcccggccgcaaacctaaacctatatgggagggtctgggtgggcatctaacctcTGTGGCGTCTCTGGTTCTGGACGCCGCCCCCCTTCTTTAGCCTGAGTCCGTCTTGTAGCACTGATCCGTGGATCATcgttggaggctctggactgcagatcCTCGCCGtaggccccgggctggggaccctcgttgcgtGTTTTCGCCGTTCCTCCCGTGCTATCTCCACCTGCCTCTatggtaggcgatcctctcctgccagtatttcctcccacgtccaggatcctttaCCGTCCAGTATTTCGTCCCATGTTCATGCTTTCTGCTCCATCAAACGCTGCTCCTCCTTTTCACGCTGCTTGGACCTTTTATGGTGGGTtgttctgtcacgttcgtcgtaacgaTGAGACctaggcgcagcgtgataagtgTACATAACTCCTTTAATAaaagagagaacactgaacaaaactatacaaaacaactaAATGAACCGTGAAGCTACGTAccgtgcct

Function

NR:

description
PREDICTED: protein SCAI-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003329 True 528 lncRNA 0.54 1 51342486 51343013

Neighbor

gene id symbol gene type direction distance location
LOC110500686 LOC106608678 coding upstream 10294 51316814 ~ 51332192 (+)
LOC110500685 NA coding upstream 41290 51298879 ~ 51301196 (+)
LOC110500679 LOC106608674 coding upstream 111666 51217984 ~ 51230820 (+)
LOC110500680 LOC106608673 coding upstream 125557 51202043 ~ 51216929 (+)
LOC110500677 LOC106608671 coding upstream 168299 51169316 ~ 51174187 (+)
LOC110500687 LOC106608680 coding downstream 8300 51350884 ~ 51361534 (+)
LOC110500885 LOC106608683 coding downstream 27708 51370721 ~ 51413247 (+)
LOC110500691 LOC106608684 coding downstream 114215 51457228 ~ 51485888 (+)
LOC110500694 LOC106608686 coding downstream 158585 51501598 ~ 51507145 (+)
LOC110500695 LOC106608687 coding downstream 166270 51509283 ~ 51554830 (+)
G1749644 NA non-coding upstream 893 51341367 ~ 51341593 (+)
G1749642 NA non-coding upstream 2579 51339518 ~ 51339907 (+)
G1749641 NA non-coding upstream 3786 51338343 ~ 51338700 (+)
G1749640 NA non-coding upstream 4396 51337668 ~ 51338090 (+)
G1749634 NA non-coding upstream 27674 51314321 ~ 51314812 (+)
G1749659 NA non-coding downstream 22396 51365409 ~ 51365714 (+)
G1749674 NA non-coding downstream 41332 51384345 ~ 51385146 (+)
G1749677 NA non-coding downstream 46682 51389695 ~ 51403541 (+)
G1749649 NA non-coding downstream 70358 51413371 ~ 51414218 (+)
gbrap gbrap other upstream 200478 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 209148 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 739209 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1732906 49606099 ~ 49609714 (+)
G1747814 LOC106606817 other upstream 1895860 49445839 ~ 49446626 (+)
G1749651 NA other downstream 19673 51362686 ~ 51363380 (+)
G1749650 NA other downstream 75956 51418969 ~ 51450475 (+)
G1750012 NA other downstream 728587 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 751696 52094709 ~ 52095105 (+)
G1750050 NA other downstream 848187 52191200 ~ 52197007 (+)

Expression


Co-expression Network