G1749659


Basic Information

Item Value
gene id G1749659
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51365409 ~ 51365714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003344
gtgtgttttcctgcaagacaggaatgtcagcgttcttccatggccagcgaagagcccggatctcaatcccattgagcacgtctgggacctgttggatcggagagtgagtgctagagccattccccccagaaaggTCTGGGAACTtataggtgccttggtggaagagtggagtaacatctcacagcaagaactggcaaatatggtgcaatccatgaggagTTGATGTACTGCAGTacctaatgcagctggtggccacaccagataccgactgttacttttgattttgacaccaccttttgttcaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003344 True 306 lncRNA 0.50 1 51365409 51365714

Neighbor

gene id symbol gene type direction distance location
LOC110500687 LOC106608680 coding upstream 3875 51350884 ~ 51361534 (+)
LOC110500686 LOC106608678 coding upstream 33217 51316814 ~ 51332192 (+)
LOC110500685 NA coding upstream 64213 51298879 ~ 51301196 (+)
LOC110500679 LOC106608674 coding upstream 134589 51217984 ~ 51230820 (+)
LOC110500680 LOC106608673 coding upstream 148480 51202043 ~ 51216929 (+)
LOC110500885 LOC106608683 coding downstream 5007 51370721 ~ 51413247 (+)
LOC110500691 LOC106608684 coding downstream 91514 51457228 ~ 51485888 (+)
LOC110500694 LOC106608686 coding downstream 135884 51501598 ~ 51507145 (+)
LOC110500695 LOC106608687 coding downstream 143569 51509283 ~ 51554830 (+)
LOC110500700 LOC106608599 coding downstream 1596418 52962132 ~ 52963960 (+)
G1749646 NA non-coding upstream 22396 51342486 ~ 51343013 (+)
G1749644 NA non-coding upstream 23816 51341367 ~ 51341593 (+)
G1749642 NA non-coding upstream 25502 51339518 ~ 51339907 (+)
G1749641 NA non-coding upstream 26709 51338343 ~ 51338700 (+)
G1749674 NA non-coding downstream 18631 51384345 ~ 51385146 (+)
G1749677 NA non-coding downstream 23981 51389695 ~ 51403541 (+)
G1749649 NA non-coding downstream 47657 51413371 ~ 51414218 (+)
G1749654 NA non-coding downstream 49066 51414780 ~ 51416353 (+)
G1749650 NA non-coding downstream 53255 51418969 ~ 51450475 (+)
G1749651 NA other upstream 2029 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 223401 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 232071 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 762132 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1755829 49606099 ~ 49609714 (+)
G1750012 NA other downstream 705886 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 728995 52094709 ~ 52095105 (+)
G1750050 NA other downstream 825486 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 1596735 52962449 ~ 52972383 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_02905987_02907006 GPR17 coding CI01000340 null 2905128 ~ 2907074 (+)