G1749654


Basic Information

Item Value
gene id G1749654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51414780 ~ 51416353 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003339
gggacacacagtCAGCACATCAGTGGAGTGGGGGGGACACAGTCAGCACATCAGTGGAGTGGGGGGGACACAGTCAGCACAtcagtggagTGGGGGGGGACACAGTCAGCACATCAGTGGAGTGGACCATCGAAGTCATGAAGTGTAACTACATCAGTGTGTtgctataattaagcaataaggcccgaggaggtttggtatatggctaagggctgttctttggcacaatgcaacgcggagtgcctggacacagcccttagccattaaggcctgaggaggtgttgttagtctaaaagaaatggtagataatgtctagatgctttttatagtggagatcaagtttataaagtgCCTGggtgggctgatgagacagtggattgcgcagtcagatggaacagagtaaataggcattttaacgtcatagatttagctggtggtaacttgtggaatagacaccggctggaatgcggttttaaccaatcagcattcaggattagtcCCACCCAATGTttaaatggccaatataccacggctaagggctgttcttatgcacaacgcaatgcagagtgcctggacacagcccttagccgtggtatattggccatataccacaaacacctgaggtaccttattgctattataaagtgGTTACTAACGTAATCagagaagtaaaaataaaaagttgTTAAGTATCTCAACAGCAATGGGGAAGTGTTTTAAGATTTGATACTTTAGGTTTATGGGAACTGGAGCTGTCAATTGTCTGTGTAGCAGTGTTTGGGTGGATGTACTGGACTACTCTGATGTCTTGTTTCGACTACAATGACAGGTCAGTTGATGGTTACAGTACCTGGTGGGCTCTGCAGATGAGGTCCAGATCGTGACGGTTGAGGAACTTGCTGACCACATCAGCCCCAAACGTGAACGAGACCCCGCGGTCGTTCTCCCCCCAACCCTGAACATCTTTGTCTGGGTCCGACCACAGCAAGTCGCACAGCaaccctggaacacacacacacacacacacacggatctgAGATGTGTAAAATGGCCTCACGGTCC

Function

NR:

description
PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003339 True 1062 lncRNA 0.48 2 51414780 51416353

Neighbor

gene id symbol gene type direction distance location
LOC110500885 LOC106608683 coding upstream 1533 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 53246 51350884 ~ 51361534 (+)
LOC110500686 LOC106608678 coding upstream 82588 51316814 ~ 51332192 (+)
LOC110500685 NA coding upstream 113584 51298879 ~ 51301196 (+)
LOC110500679 LOC106608674 coding upstream 183960 51217984 ~ 51230820 (+)
LOC110500691 LOC106608684 coding downstream 40875 51457228 ~ 51485888 (+)
LOC110500694 LOC106608686 coding downstream 85245 51501598 ~ 51507145 (+)
LOC110500695 LOC106608687 coding downstream 92930 51509283 ~ 51554830 (+)
LOC110500700 LOC106608599 coding downstream 1545779 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 1553155 52969508 ~ 52971316 (+)
G1749649 NA non-coding upstream 562 51413371 ~ 51414218 (+)
G1749677 NA non-coding upstream 11239 51389695 ~ 51403541 (+)
G1749674 NA non-coding upstream 29634 51384345 ~ 51385146 (+)
G1749659 NA non-coding upstream 49066 51365409 ~ 51365714 (+)
G1749650 NA non-coding downstream 2616 51418969 ~ 51450475 (+)
G1749655 LOC106608688 non-coding downstream 154058 51570411 ~ 51573264 (+)
G1749835 NA non-coding downstream 360048 51776401 ~ 51777211 (+)
G1749836 NA non-coding downstream 361358 51777711 ~ 51780760 (+)
G1749651 NA other upstream 51400 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 272772 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 281442 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 811503 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1805200 49606099 ~ 49609714 (+)
G1750012 NA other downstream 655247 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 678356 52094709 ~ 52095105 (+)
G1750050 NA other downstream 774847 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 1546096 52962449 ~ 52972383 (+)

Expression


Co-expression Network