G1749650


Basic Information

Item Value
gene id G1749650
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51418969 ~ 51450475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003334
ATCATAGAAGCCATAGATGCGGTTGATGGAAGCACACTCGTGGTTGCCCCTGAGGAGGAAGAAGTTCTCAGGGTATTTGATCTTGTAGGCCAGCAGTAGACAAATGGTTTCCAGGGACTGCTTGCCTCGGTCCACGTAGTCCCCCAGGAACAGGTAGTTGGCCTCGGGCGGGAAGCCCCCGTACTCAAAGAGCCGCAGCAGGTCTGTGTACTGGCCGTGGATGTCACCACAGATTTTGAGGGGAGCCTCCAATTCCAACAGGATGGGCTGGCTGAGGAAGATCTCTCTGGACTTGATGCAGAGGCCTCTCACCTCAGCCTCTGACATCTGCACAATCTTCCCTGGGCGACATCCCCgcaCCTCTAATAATCGGGCGATCAGCGAGTCGACGTCCAATTCCCCCTCCGCCATTTCTGTAGTGGGTGGTGCTCTCAAACAGCACTCTTTCTCTCCACTGCTTACTGCTGCCACAGTCCCTGGCAGGCACCGCATAAAC
>TU2003335
ATCATAGAAGCCATAGATGCGGTTGATGGAAGCACACTCGTGGTTGCCCCTGAGGAGGAAGAAGTTCTCAGGGTATTTGATCTTGTAGGCCAGCAGTAGACAAATGGTTTCCAGGGACTGCTTGCCTCGGTCCACGTAGTCCCCCAGGAACAGGTAGTTGGCCTCGGGCGGGAAGCCCCCGTACTCAAAGAGCCGCAGCAGGTCTGTGTACTGGCCGTGGATGTCACCACAGATTTTGAGGGGAGCCTCCAATTCCAACAGGATGGGCTGGCTGAGGAAGATCTCTCTGGACTTGATGCAGAGGCCTCTCACCTCAGCCTCTGACATCTGCACAATCTTCCCTGGGCGACATCCCCgcaTTTTCAAATCTGTGTTTATAACCACAACAGGAACACATGGTGAGTCAGTCCGGCCCAATGTCCCGAGGGTGAGGTTTTCATGAAACAGCCAAACAGGGTAAATATGGTAAAtactggtactgcctgtatataaccatgttattttcactcgttattgttattcactgtgtatttattcctcatggcACTACCTTAAACTCTGCATTGTTAGAAAAGGacctgaaagtaagcatttcacagttagTTAGTCTAcactagggctgtggcagtcacaaaatgttgtcagccagtgattgtcaagcaaataactgtcggtcgcATGGTAATTGATCGTTAATTAATATAAACACATTTAGTATCTCCTGGCATCCACACAAAGATTTATTAGACATTTTTAAATGTCTAATAAATCCGTgttatatagcctacaccttcacaataaatcctttatttattttagacaggtctaaagaaacatgatttgaagaaaatatagtctatttcagaagaacagaataacatACTCTGAGTAGTCCtgatgttaggccctgatctggctatgccatatggctgcgGGCTACACtggttcattatttatttatattatatttattattattattttaaagtaTGAAGAATAGAATTGAACGAAGATGAATAAAATCtaaatattttctccaaatgatttgagAGAGTGAAcacatgcagctattctgtgttgagggCTAAACAAAGAAACTGGTCCTCCTATATGTTTCATTTAGAGTTATCAATGTAACTTTAAAGCAGATGAATGTGCTTAATTTCACGACGTTATTTGGGCACTTTAGttatgatacaaaccttattaaaacctataggtctatgggctaggctatatcaggtgtgcgactatgattagaAAAAGCTGCAAAagaaaggcattgtttcttacACTGGGCATCATTCACTAGTGATAATATAtgattcacaagtgataggctaatattgtcacacatcagactattcttgatttagtTTTGTCATTACATATACTacataatatatgtgtgaaattagttatgatttagaatggaccatttatcatgcacctgtctcaaaacaggggaaacaggggcaGTGAGAAAAAAGACATGTGATCTATGcacatggttcattttcatgccagccaggtagactatactcctgttgtaaagagaagcaatgtgcttaatattaggaaagttgagaaataaatatagggGCCTAGCATATAGAacgctgatgggatcctcctctttttattagCGGCCATCACTCTGTTCTCTACCACAATTGCACAGCcaatagaaatgttgcgcaacatgagctcatggactCTCATGAAGTGTGTGATTAGActtttgattacatttgcattgacgtcagagtgattagagggacaatagagtgctgtgtaccaggcagttagcaagtttgctAGGCTAatagcatcagagcttggagaagccttattaccatgactaaacggtcatgtggaatttgactgccttcatgactcgtgaccgccggtatggcggtaacacggtcaccgcaacagccctaggttACACTcattgtttatgaagcatgtgacaaataaaattggatttgatatgAGGGCCTGGGTTGTGTCAACACAGTGGTCCCAATAGACAGACAGCATGCAGAGTGCCTCCACAACGCCAGCCATTCAGAATAAGTGAGGCCTGGGACTGTGTAAGCATCCCTTCTCACATGATGATCGCTACAGTTAGGCCTACTAACACTAGGAACAAAAGCACTGGCTGTGGTTGTTATTTAACAGGAAATAACCGGGTCACGTTCATTTAGTCAGCTACATGTAGACAAAGGTGTCCCTAAAGCATTTTAAATGAAAAGGGTACATTGAACAATGGGCGCAATTCATCATACATTTGAGAAACTAGATATCTTCAGTTATAACTAAGAGAAATGGTTTTCATAGCATGCATTTGAAAAGAAGACATGCACAATGGATTTATTGCCAAACCCCTTTCTAAACATGTACTCCATTTCGCATTGCTAGCTATTTAATGGCAGACTACGGATGAGGCATAGGTATGGGCAGAGAGATTCCTACAAGTTACCGAGACACTGCCTAGCACCACTTGCACTGTCGACTGGAACTTTGTACGACCTGGCTATTTCTGCACCGAGACCTTAAACCAGCTGTATAGACATTCACTGTTCTCCTCCAAAAACACACATGAAAAAGTGATCTAAGCCCATCAGATAATATATCTCGTATCCCAAAGAGAGTCACGTTAACAAGAAGTCAAGGGGTGTTATTCTTAGTAGCCATAGCATTCAGCAGTCTGATCTGTTTGATTTAGAGGGGGTCTCAATCGGAAAAATATAGACACACACCCCTTCTGActtccagcacacacacacaccagtgaggATGAAACCTGAGGAGGCTGGGGTcagatgggtgtgtgtgtacgtacgtcTGTGTGTGTTGCGCTCAGATCTGCCACAGacacactccacctctccctctcagaGCGGTGCTGACGTGTCTGCAGGTCTGTGTTGTATCAGCTGACAGAGAAGCGACTGAAAGGCCCAATATAGGAGAGGAGAGCATCACACCAGACACCACAGCCAGACACTACCACACCGCAACACTGGAGGGGATCGCCTTACAGCCCGTTATGGAAAAGTCTACACGATagacatgcgcgcacacacagccTGCCAGCCACAGTCTTGTGACCTTGACTTCAGATACCTCCCATGAATCCTCCCAGTGGTTGCATCAACCCACTAATCCTGCCCTCTTTTCACTGCACTGCAACAGTCAACGGTGAGGGGTGGAACAACAGGCTGTCACCATGgcaacacaccaggcaggtcattGGTTTTTGGCAAGGTGTTGATGGGTGTTGGTTGCTAGCTTAAGGCGGAGCTGATTGGCAGACACAGAGGCTCCTCCTCTCCAGCTACCTCATGGTTTGAATACTAATGTGTCATGTCATGGCCACTGACTGATGTAGAGAGCAGACTTCCACACCCTAAGCCCAGGATGTTTATGAACAGGCGTCACCACTTGTTTGGTTGAGTCAAAATGCGCACTGTAGAATAAAGTTAAATTTTGTCAAAAGTTACTTGAATTGAAAAGACATTATCGTTTCCTGTGGGTTTGTATTGCTTCATATGTGAGGTTGGTACGAGCTTAAAGTGTGGTTTTTCTTTGGTTCTGTGGGAAAAAAAGAATCCCTCGCTCCACCTTCCAATTCATCACTCCTAATTCGGCCCTGTCCTGACAGTTTGTGTGCACACACTGCTAAAAAGGGTATGTGGAGAATAGGGGTACTACACAAGCTGACCCTTCCAACACCAGTACAAAATGTTCTGCTCTGTACTTTTCCCTCTGCCAGGTCAGATCACCCTCCTATCCAaaccctctctccttctatcctctcctcctccccttctttccccctctcaTCTATTTATCTGACAGCTCTTCTGAAGCGGTAGTCTGTGACATCACAGGACAGCCTGGCCCTGGCCctcccctaacacacacacagcattccaCAAGGCCAGcccacacacgcagacacacacacacacgcagacacacgcagacacacgcagacacacgcagacacacgcgCACAACAGCAAACCTCCTGAGGGTTAAGCCTGTCCTGTCTGCGCCAAAAAGGAGAGGAATCAAGTTCTTACACTACATCCTGATGTAACAAACCCAACCAAAGAGAGTTGTGTCACAAAGCATTCCCTGGAAGACGATGAGCCTAAACAGGACAGTGTGGAGAGGGAAACTAAAACAGGGTACATATCAAAGAAGCTcagcatagagagagacaaacgtGAGCTGGGTTTGTTTGAGAACGCTGTTAGTCAGAGACAGGGCTGAATTCATTGGAGGTAGAGCTTGTTTTTCGTTTTGATATTTAGCAAAGTAAAAGGCTGTCTAAATTTGGATAAAATATAACTTCAGAGATGTATCTGAAAATGGGATGGTTTTATGCAATTAAAGAACATCTGGAAGCTAAAAGACTGGCTCATTGTGTGGGAAACGTCGTATTTACAGCCATTGCATTCAGCAGTCTGATATGTTGTCGTTTTCTAGACAACACAAAGGAAGTCTTGTGGTGGTTATAGGGGAACTTGTAGTCTATTTAGAAGTGATCTTTTTTTAGTTTCTTTAGCTGAGTGTTATTAAGGAAAGAGGTCAGGTGGGTCGAGAACTTTTCCATTCATTTAAAAGAGCAGGGTTCAGTTAATGTTGGAGTTGAAGGGGAGAGAAGCTGAATAACAGTCAGACCGTGCTTCTCCCAGGCATGACCATATATGGGCGCTGtttcagaggagaggaaggagtccCTCAGGACAAAAGAGGACTGAGGGAGAGCACTTCAAAAAGTCTCCAGCCTCGGCCAACTGATGCTAAGTGCACTAACACCAGCTAGCACCAACTAGCTAGTCAGGTTCACTTAACAACAtctgacaacaacaacacaagtCTCCCCCTGGCAGCCACAATGACAGAGCTACAACAATACATGCCCTGTTAGCTGCTGCAGCTAACCATTCACAACATTAGCCCATTCATTATATGAGGCCAGCAAGGGCAGCTCAGACGGTCACACTGACAGACATACCACACTGACTGGGACTATTTTAACAGAAGttaagaggaaaagagagggaaatgATTAGCTTTTTCTCCATACTACGTCCAATTCAGATATAAACCTTTCAAACTCACTCAGATCAAGGCTCCATATGAGTTAACACAACTCGTGAATTTTAAGCAGGTGAGGGGTGTGCTTTGTCAGACCACCAAAGGTGTAATGGCCCAACTATGGTAATGACCTCAGTGATATTTCACCAGTCTCCATCTTCATGCATCTTGCTTTCTTCCTACCAGGCACCGGGCCAGGTTtccccccctccactccctcctccaTGCCCATGTCCCACAAACAGGGGGTGGAAACCAGTGAACCCACAGTGGACACGCAGCAACCTGACTCTGGGTCCGAGTGGATGTCAAGCAGAAATCCCAACTGCCTTCCATGGCATTTCAGACACGTTTTTCTTCAGAGCACTTTTTTGTTCTTCATGAAGTGTCAGGTGAATGCCTGTGAATGGCAGTCATTGTGtagcgagagagggagacagaaagagagggagagaaaatagataaaagggagagaaagtgaaagggagaaaaatagagagtgtgatggatggagagaaaatagagaaagaGCAGTTTATGTGCAGTGCCATGGttggtgccagagagagagacgctccGTGCTGCCCTCCCcgcgccacacacacaccaccattgtTGTTTCCATAACAGTCAGTGGCGCACCACACTCACTGTCATTGCATACACTACCGTAAATTACCGtccattttttgtccatttttataataacatcaaattgatcagaaatacagtgtagacattgttaatgttgtaaatgactgtagacattgttaatgttgtaaatgactattgtagctggaaacggcagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003334 False 496 TUCP 0.56 3 51418969 51450475
TU2003335 True 5928 lncRNA 0.44 4 51418969 51425541

Neighbor

gene id symbol gene type direction distance location
LOC110500885 LOC106608683 coding upstream 5722 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 57435 51350884 ~ 51361534 (+)
LOC110500686 LOC106608678 coding upstream 86777 51316814 ~ 51332192 (+)
LOC110500685 NA coding upstream 117773 51298879 ~ 51301196 (+)
LOC110500679 LOC106608674 coding upstream 188149 51217984 ~ 51230820 (+)
LOC110500691 LOC106608684 coding downstream 31687 51457228 ~ 51485888 (+)
LOC110500694 LOC106608686 coding downstream 76057 51501598 ~ 51507145 (+)
LOC110500695 LOC106608687 coding downstream 83742 51509283 ~ 51554830 (+)
LOC110500700 LOC106608599 coding downstream 1536591 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 1543967 52969508 ~ 52971316 (+)
G1749654 NA non-coding upstream 2616 51414780 ~ 51416353 (+)
G1749649 NA non-coding upstream 4751 51413371 ~ 51414218 (+)
G1749677 NA non-coding upstream 15428 51389695 ~ 51403541 (+)
G1749674 NA non-coding upstream 33823 51384345 ~ 51385146 (+)
G1749659 NA non-coding upstream 53255 51365409 ~ 51365714 (+)
G1749655 LOC106608688 non-coding downstream 144870 51570411 ~ 51573264 (+)
G1749835 NA non-coding downstream 350860 51776401 ~ 51777211 (+)
G1749836 NA non-coding downstream 352170 51777711 ~ 51780760 (+)
G1749858 NA non-coding downstream 395112 51820653 ~ 51820956 (+)
G1749651 NA other upstream 55589 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 276961 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 285631 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 815692 50598799 ~ 50615280 (+)
LOC110500625 cj011 other upstream 1809389 49606099 ~ 49609714 (+)
G1750012 NA other downstream 646059 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 669168 52094709 ~ 52095105 (+)
G1750050 NA other downstream 765659 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 1536908 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 1826208 53251413 ~ 53256660 (+)

Expression


Co-expression Network