G1749949


Basic Information

Item Value
gene id G1749949
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 51967271 ~ 51967881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003688
ggaaggatagatgtcaggagaggacagaagggagggggagaggaaggatagatgacaggagaggacagaagggaggggagaggaaggatagatgacaggagaggaaggatagatgtcaggagaggacagaagggagggggagaggaaggatagatgacaggagaggacagacggGAGATTgagaggaaggatagatgacaggagaggaaggagagatgacaggagaggaaggatagatgtCAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003688 True 246 lncRNA 0.53 2 51967271 51967881

Neighbor

gene id symbol gene type direction distance location
LOC110500695 LOC106608687 coding upstream 412441 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 460126 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 481383 51457228 ~ 51485888 (+)
LOC110500885 LOC106608683 coding upstream 554024 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 605737 51350884 ~ 51361534 (+)
LOC110500700 LOC106608599 coding downstream 994251 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 1001627 52969508 ~ 52971316 (+)
LOC110500702 LOC106608597 coding downstream 1021481 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 1137676 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 1180938 53148819 ~ 53159292 (+)
G1749888 NA non-coding upstream 93932 51872583 ~ 51873339 (+)
G1749864 NA non-coding upstream 137468 51829224 ~ 51829803 (+)
G1749858 NA non-coding upstream 146315 51820653 ~ 51820956 (+)
G1749836 NA non-coding upstream 186511 51777711 ~ 51780760 (+)
G1749835 NA non-coding upstream 190060 51776401 ~ 51777211 (+)
G1750013 NA non-coding downstream 104349 52072230 ~ 52076431 (+)
G1750028 NA non-coding downstream 125895 52093776 ~ 52093990 (+)
G1750032 NA non-coding downstream 131321 52099202 ~ 52099407 (+)
G1750043 LOC106608688 non-coding downstream 143978 52111859 ~ 52112224 (+)
G1750046 NA non-coding downstream 147691 52115572 ~ 52115952 (+)
G1749650 NA other upstream 516796 51418969 ~ 51450475 (+)
G1749651 NA other upstream 603891 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 825263 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 833933 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 1363994 50598799 ~ 50615280 (+)
G1750012 NA other downstream 103719 52071600 ~ 52079002 (+)
G1750030 LOC106608688 other downstream 126828 52094709 ~ 52095105 (+)
G1750050 NA other downstream 223319 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 994568 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 1283868 53251413 ~ 53256660 (+)

Expression


Co-expression Network