G1750012


Basic Information

Item Value
gene id G1750012
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 52071600 ~ 52079002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003752
AATAGTGAAGGAGGTGAGaaattaatctctctctctctttcacctctctctccttcatctaatTAATCTCCCTCTTCATCGTCCTCCCCATCTTCCTCTATCTATCATTTattctctctatcttcctctttctatcgtttcatctctctatcttACTCTTTCTATCGTTTCATCTCTCTATTTTCCTCTGTCTATcgtttcatctctctatcttcctctttctatcgtttcatctctctatcttcctctttctatcgtttcatctctccatcttcctctatcgtttcatctctctatcttcctctttctattgtttcatctctctatcttcctctttctatcgtttcatctctctatcttcctctatcgtttcatctctctctatcttcctctttctatcgtttcatctctctattttcctctatcgtttcatctctctatcttcctctttctatcgtttcacctctctatcttcctctttctgtcgtttcatttctccatcttcctctttctatcgtTTCAATTCTCTATCTTCCTCATCTATcgtttcatctctctatcttcctctttctatcgtttaatctctctatcttcctctttctatcgtttcatctctctatcttcctctatcGTTTCacctctatcttcctctttctgtcgttTCATTTATCTATCTTCCCCTTTATATcgtttcatctctctatcttcctctttctatcgtttcatctctctatcttcctctatcGTTTcacctctctatcttcctctctgtCGTTTCAtttctctatcttcctctttctgtcgtttcatctctctatcttcctctttctgtcgttTCATTTCTCTATCTTCCTATGTCTATCGTTTCACCTCTCGATCTTCCTCTGTCTATcgtttcatctctctatcttcctctgtcTATCGTTTCATCTCTCTAACTTCCTCTTTCTATCGTTTattctctctatcttcctctttctatcccttcatctctctatcttcctctttctatctcttcatctctctatcttcctctttctatctcttcatctctctatcttcctctttctatctcttcatctctccctcttcctctttctatctcttcatctctctatcttcctctttctatctcttcatctgtctatcttcctcttctctctatcttcctctttctatctcttcctctttctaccccttcatctctctatcttcctcatctctctatcttcctatttctatctcttcatctctctatcttcctctgtctatcgtttcatctctctatcttcctatTTCTATCGTTTCATCTCTcgatcttcctctttctatcactCCATCTCTCGATCTTCCTCTGTCTATcgtttcatctctctatcttcctctttctatcgtttcatctctctatctatcgTTTCATCTCTCTAACTTCCTCTTTCTATCATTTcacctctctatcttcctctttctgtcgtttcatttctctatcttcctctttctatcgtttcatctctctctccctctcctggtgGATTTAGTTGATTTGGACCACGTCACCCAGCATGCAGCAGCAGCGTTGCCCTTGGAGACCCCATCATTCTGCTACGGGAGTATGAACCCAGACAGCATCAATGTGCTGTTGCTCCTCTCATTACACCTCCCATAACAAGCCTATATTTAACCTTTAATCTCTCTGTCAGCCTATCAGGTTGAATGGGCTGCCATCTCACCATGCAAGTTGAACACTAAGAGACTAGGGGTGTATCTCAATGCTGTTAAGTTGCTTCCATTTCTTGTGTTTTCATCTCCATGATCACTCATCTGGCATGGCCTAAAATGGCCAGGCACATATGTTCAAAGCCTATTAAATCCTTTCACTTGTTTGTGTTAAAAGTATACATGGAAAGGAAGCCATGAATGAGTATTGACACACCCAAGGAGATGAGTTGTGTACCATCTTACCAAGCCATTAGGGTAGTGAAAAATGGTACAACATGGGGACAGGTAAGGAATCTTCTGTGGCACCATACAGGGCTGGTGGGCAGGGTGGCACCACACAGGACTGGTGGGCAGGGTGGCACCATACAGGACTGGTGGGCAGGGTGGCACCATACAGGAATGGTGGGCAGGGTGGCACCATACAGGACTGGTGGGCAGGGTGGCACCATACAGGACTGGTGGGCAAGGTGGCACCATTCAGGACTGGTGGGCAGGGTGGCACCATACAGGATTGGTGGGCAGGGTGGCACCACACAGGACTGGTGGGCAGGGTGGCACCATACAGGACTGGTGGGCAGGGTGGCACCACACAGGACTGGTGGGCAGGGTGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003752 True 2332 TUCP 0.43 4 52071600 52079002

Neighbor

gene id symbol gene type direction distance location
LOC110500695 LOC106608687 coding upstream 516770 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 564455 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 585712 51457228 ~ 51485888 (+)
LOC110500885 LOC106608683 coding upstream 658353 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 710066 51350884 ~ 51361534 (+)
LOC110500700 LOC106608599 coding downstream 883130 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 890506 52969508 ~ 52971316 (+)
LOC110500702 LOC106608597 coding downstream 910360 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 1026555 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 1069817 53148819 ~ 53159292 (+)
G1749949 NA non-coding upstream 103719 51967271 ~ 51967881 (+)
G1749888 NA non-coding upstream 198261 51872583 ~ 51873339 (+)
G1749864 NA non-coding upstream 241797 51829224 ~ 51829803 (+)
G1749858 NA non-coding upstream 250644 51820653 ~ 51820956 (+)
G1749836 NA non-coding upstream 290840 51777711 ~ 51780760 (+)
G1750028 NA non-coding downstream 14774 52093776 ~ 52093990 (+)
G1750032 NA non-coding downstream 20200 52099202 ~ 52099407 (+)
G1750043 LOC106608688 non-coding downstream 32857 52111859 ~ 52112224 (+)
G1750046 NA non-coding downstream 36570 52115572 ~ 52115952 (+)
G1750049 NA non-coding downstream 41095 52120097 ~ 52120307 (+)
G1749650 NA other upstream 621125 51418969 ~ 51450475 (+)
G1749651 NA other upstream 708220 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 929592 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 938262 51116362 ~ 51133346 (+)
LOC110500883 LOC106577571 other upstream 1468323 50598799 ~ 50615280 (+)
G1750030 LOC106608688 other downstream 15707 52094709 ~ 52095105 (+)
G1750050 NA other downstream 112198 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 883447 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 1172747 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 2127696 54206483 ~ 54342581 (+)

Expression


Co-expression Network