G1750030 (LOC106608688)


Basic Information

Item Value
gene id G1750030
gene name LOC106608688
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 52094709 ~ 52095105 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003773
GCACCACTCCCCGTCGTTCACCTTCTTATTACTGGTCTTCAGCTTGATACTCCCAGATCCCATGTCCATTAGCAGGTAGAGAAACCCATCCAACAGCTCCATGGCGAAGTAGTCCGACTTCATGTCACGACctggtttctgctctttaggacCCTGGGTGCGCCCGTGGCTAAACAGGAGCAGGCCGCTGGGTTCTGTGGTGCGGAAGTCGAAGGAGATGGAGCCTGTTTTCTTGGTGTTCCACTTGGGCAGGGCGATGAAGGACTCTGGGGACTCAAAGGTGACAGGGTCCAGGGCGGCCACGTCCTCACAGCGGAAAACAAGATCTCCGTTCAGGCTGATTTTAGGGTCCCGCTCGATGGCTAGCCGGGAGAGTTCTAGCTTGAAGTCGTTATTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003773 True 397 TUCP 0.55 1 52094709 52095105

Neighbor

gene id symbol gene type direction distance location
LOC110500695 LOC106608687 coding upstream 539879 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 587564 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 608821 51457228 ~ 51485888 (+)
LOC110500885 LOC106608683 coding upstream 681462 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 733175 51350884 ~ 51361534 (+)
LOC110500700 LOC106608599 coding downstream 867027 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 874403 52969508 ~ 52971316 (+)
LOC110500702 LOC106608597 coding downstream 894257 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 1010452 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 1053714 53148819 ~ 53159292 (+)
G1750028 NA non-coding upstream 719 52093776 ~ 52093990 (+)
G1750013 NA non-coding upstream 18278 52072230 ~ 52076431 (+)
G1749949 NA non-coding upstream 126828 51967271 ~ 51967881 (+)
G1749888 NA non-coding upstream 221370 51872583 ~ 51873339 (+)
G1749864 NA non-coding upstream 264906 51829224 ~ 51829803 (+)
G1750032 NA non-coding downstream 4097 52099202 ~ 52099407 (+)
G1750043 LOC106608688 non-coding downstream 16754 52111859 ~ 52112224 (+)
G1750046 NA non-coding downstream 20467 52115572 ~ 52115952 (+)
G1750049 NA non-coding downstream 24992 52120097 ~ 52120307 (+)
G1750055 NA non-coding downstream 29161 52124266 ~ 52124495 (+)
G1750012 NA other upstream 15707 52071600 ~ 52079002 (+)
G1749650 NA other upstream 644234 51418969 ~ 51450475 (+)
G1749651 NA other upstream 731329 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 952701 51134089 ~ 51142008 (+)
LOC110500674 dulda other upstream 961371 51116362 ~ 51133346 (+)
G1750050 NA other downstream 96095 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 867344 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 1156644 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 2111593 54206483 ~ 54342581 (+)
G1753100 NA other downstream 2906474 55001579 ~ 55011678 (+)

Expression


Co-expression Network