G1750046


Basic Information

Item Value
gene id G1750046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 52115572 ~ 52115952 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003790
atccccaaatccagatgtgcaaagcatATACAGACATACcaaagatgactcaaagctgatacagacatacccaagatgactcaaagctgatacagacatacccaagatgactcaaagctgatacagacatacccaagacgactcaaagctgatacagacatacccaagatgactcaaagctgatacagacatacccaagatgactcaaagctgtatttgccgccaaaggtgcttccacaaagtattgactcgggtgtgaatacttatataaatgagatatttctggttttcattttcaataaatgtacaaacattttaaaaaacatgttttcatttagTTATTACGAGGTAGTGTGTGAGGGGAAAAAAAGCTAATTAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003790 True 381 lncRNA 0.38 1 52115572 52115952

Neighbor

gene id symbol gene type direction distance location
LOC110500695 LOC106608687 coding upstream 560742 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 608427 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 629684 51457228 ~ 51485888 (+)
LOC110500885 LOC106608683 coding upstream 702325 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 754038 51350884 ~ 51361534 (+)
LOC110500700 LOC106608599 coding downstream 846180 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 853556 52969508 ~ 52971316 (+)
LOC110500702 LOC106608597 coding downstream 873410 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 989605 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 1032867 53148819 ~ 53159292 (+)
G1750043 LOC106608688 non-coding upstream 3348 52111859 ~ 52112224 (+)
G1750032 NA non-coding upstream 16165 52099202 ~ 52099407 (+)
G1750028 NA non-coding upstream 21582 52093776 ~ 52093990 (+)
G1750013 NA non-coding upstream 39141 52072230 ~ 52076431 (+)
G1749949 NA non-coding upstream 147691 51967271 ~ 51967881 (+)
G1750049 NA non-coding downstream 4145 52120097 ~ 52120307 (+)
G1750055 NA non-coding downstream 8314 52124266 ~ 52124495 (+)
G1750069 LOC106608688 non-coding downstream 39321 52155273 ~ 52155733 (+)
G1750092 NA non-coding downstream 100769 52216721 ~ 52216929 (+)
G1750105 NA non-coding downstream 123763 52239715 ~ 52239990 (+)
G1750030 LOC106608688 other upstream 20467 52094709 ~ 52095105 (+)
G1750012 NA other upstream 36570 52071600 ~ 52079002 (+)
G1749650 NA other upstream 665097 51418969 ~ 51450475 (+)
G1749651 NA other upstream 752192 51362686 ~ 51363380 (+)
gbrap gbrap other upstream 973564 51134089 ~ 51142008 (+)
G1750050 NA other downstream 75248 52191200 ~ 52197007 (+)
G1751699 LOC106608599 other downstream 846497 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 1135797 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 2090746 54206483 ~ 54342581 (+)
G1753100 NA other downstream 2885627 55001579 ~ 55011678 (+)

Expression


Co-expression Network