G1750108


Basic Information

Item Value
gene id G1750108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 52260371 ~ 52260724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2003859
aaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccaggagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctctgtatgaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacatcaggcaggtccgagatactgtt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2003859 True 354 lncRNA 0.39 1 52260371 52260724

Neighbor

gene id symbol gene type direction distance location
LOC110500695 LOC106608687 coding upstream 705541 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 753226 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 774483 51457228 ~ 51485888 (+)
LOC110500885 LOC106608683 coding upstream 847124 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 898837 51350884 ~ 51361534 (+)
LOC110500700 LOC106608599 coding downstream 701408 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 708784 52969508 ~ 52971316 (+)
LOC110500702 LOC106608597 coding downstream 728638 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 844833 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 888095 53148819 ~ 53159292 (+)
G1750105 NA non-coding upstream 20381 52239715 ~ 52239990 (+)
G1750092 NA non-coding upstream 43442 52216721 ~ 52216929 (+)
G1750069 LOC106608688 non-coding upstream 104638 52155273 ~ 52155733 (+)
G1750055 NA non-coding upstream 135876 52124266 ~ 52124495 (+)
G1750049 NA non-coding upstream 140064 52120097 ~ 52120307 (+)
G1750109 NA non-coding downstream 984 52261708 ~ 52262738 (+)
G1750129 NA non-coding downstream 34390 52295114 ~ 52295325 (+)
G1750140 NA non-coding downstream 55172 52315896 ~ 52316460 (+)
G1750149 NA non-coding downstream 75863 52336587 ~ 52337322 (+)
G1750154 NA non-coding downstream 83570 52344294 ~ 52344517 (+)
G1750050 NA other upstream 63364 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 165266 52094709 ~ 52095105 (+)
G1750012 NA other upstream 181369 52071600 ~ 52079002 (+)
G1749650 NA other upstream 809896 51418969 ~ 51450475 (+)
G1749651 NA other upstream 896991 51362686 ~ 51363380 (+)
G1751699 LOC106608599 other downstream 701725 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 991025 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 1945974 54206483 ~ 54342581 (+)
G1753100 NA other downstream 2740855 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 3329881 55590450 ~ 55592100 (+)

Expression


Co-expression Network