G1750246


Basic Information

Item Value
gene id G1750246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 52509099 ~ 52509323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2004010
gagagagagagagagagagagagagagagacagagagagagagagggagagagagagagagagagagacagagagagagagagggggaaaaaagcaGGGCATGCATACAGTACTATACCCACTGGAACAGCCAAGAAAAAAATCACACAGTGAAGAAGCAGCAtcagaaaaaaagaaaagtgtATAAATCAACAGTGCGGGTCTTGATCAAAGCATTGCACCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2004010 True 225 lncRNA 0.46 1 52509099 52509323

Neighbor

gene id symbol gene type direction distance location
LOC110500695 LOC106608687 coding upstream 954269 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 1001954 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 1023211 51457228 ~ 51485888 (+)
LOC110500885 LOC106608683 coding upstream 1095852 51370721 ~ 51413247 (+)
LOC110500687 LOC106608680 coding upstream 1147565 51350884 ~ 51361534 (+)
LOC110500700 LOC106608599 coding downstream 452809 52962132 ~ 52963960 (+)
LOC110500701 LOC106608599 coding downstream 460185 52969508 ~ 52971316 (+)
LOC110500702 LOC106608597 coding downstream 480039 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 596234 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 639496 53148819 ~ 53159292 (+)
G1750241 NA non-coding upstream 4078 52504806 ~ 52505021 (+)
G1750229 NA non-coding upstream 39365 52469503 ~ 52469734 (+)
G1750220 LOC106582599 non-coding upstream 52731 52455932 ~ 52456368 (+)
G1750208 NA non-coding upstream 74710 52434097 ~ 52434389 (+)
G1750154 NA non-coding upstream 164582 52344294 ~ 52344517 (+)
G1751454 NA non-coding downstream 137383 52646706 ~ 52646965 (+)
G1751597 NA non-coding downstream 247516 52756839 ~ 52757162 (+)
G1751600 NA non-coding downstream 249690 52759013 ~ 52759217 (+)
G1751601 NA non-coding downstream 250009 52759332 ~ 52759838 (+)
G1751612 NA non-coding downstream 260922 52770245 ~ 52770474 (+)
G1750050 NA other upstream 312092 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 413994 52094709 ~ 52095105 (+)
G1750012 NA other upstream 430097 52071600 ~ 52079002 (+)
G1749650 NA other upstream 1058624 51418969 ~ 51450475 (+)
G1749651 NA other upstream 1145719 51362686 ~ 51363380 (+)
G1751699 LOC106608599 other downstream 453126 52962449 ~ 52972383 (+)
LOC110500722 NA other downstream 742426 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 1697375 54206483 ~ 54342581 (+)
G1753100 NA other downstream 2492256 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 3081282 55590450 ~ 55592100 (+)

Expression


Co-expression Network