G1751700


Basic Information

Item Value
gene id G1751700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 52974338 ~ 52975041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2005672
Ccggctccgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggacacctacaccacccgatgtcacaagaaggccaaaaagataatcaaggacaacaaccacccgagccactgcctgttcacccagctatcatccagaaggcgaggtcagtacaggggcatcaaagctgggcccgagagactgaaaaacagcttctatctcaaggccatcagactgttaaacagccaccactaacattgagtggctgctgccaacatcctgactcaactccagccactttaataatgggaattgatgggaaatgatgtaaaatatatcactagccactttaaacaatactacctaatataatgtttacataccctacattattatctcatatgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcatctcatatgtatatactgcactcaataccatctactgtatcttgcctatgccgctctgtaccatcactcattcatatatctttatgtacatattctttatccccttacacttgtgtctataaggtagttgttgtggaattgttagctagattacttgttggttattactgcattgtcggaactagaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2005672 True 704 lncRNA 0.43 1 52974338 52975041

Neighbor

gene id symbol gene type direction distance location
LOC110500701 LOC106608599 coding upstream 3022 52969508 ~ 52971316 (+)
LOC110500700 LOC106608599 coding upstream 10378 52962132 ~ 52963960 (+)
LOC110500695 LOC106608687 coding upstream 1419508 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 1467193 51501598 ~ 51507145 (+)
LOC110500691 LOC106608684 coding upstream 1488450 51457228 ~ 51485888 (+)
LOC110500702 LOC106608597 coding downstream 14321 52989362 ~ 52996635 (+)
LOC110500711 LOC106608589 coding downstream 130516 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 173778 53148819 ~ 53159292 (+)
LOC110500717 LOC106608585 coding downstream 189070 53164111 ~ 53214983 (+)
LOC110500719 LOC106608586 coding downstream 240188 53215229 ~ 53245179 (+)
G1751702 NA non-coding upstream 7648 52961160 ~ 52966690 (+)
G1751687 NA non-coding upstream 84038 52889765 ~ 52890300 (+)
G1751646 NA non-coding upstream 168824 52805257 ~ 52805514 (+)
G1751645 NA non-coding upstream 171887 52802224 ~ 52802451 (+)
G1751642 NA non-coding upstream 172986 52801136 ~ 52801352 (+)
G1751727 NA non-coding downstream 877 52975918 ~ 52976149 (+)
G1751729 NA non-coding downstream 2728 52977769 ~ 52977970 (+)
G1751738 NA non-coding downstream 25633 53000674 ~ 53001197 (+)
G1751739 NA non-coding downstream 32095 53007136 ~ 53007397 (+)
G1751741 NA non-coding downstream 34519 53009560 ~ 53011461 (+)
G1751699 LOC106608599 other upstream 1955 52962449 ~ 52972383 (+)
G1750050 NA other upstream 777331 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 879233 52094709 ~ 52095105 (+)
G1750012 NA other upstream 895336 52071600 ~ 52079002 (+)
G1749650 NA other upstream 1523863 51418969 ~ 51450475 (+)
LOC110500722 NA other downstream 276708 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 1231657 54206483 ~ 54342581 (+)
G1753100 NA other downstream 2026538 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 2615564 55590450 ~ 55592100 (+)
G1755158 NA other downstream 3411366 56386407 ~ 56387622 (+)

Expression


Co-expression Network