G1751759


Basic Information

Item Value
gene id G1751759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 53043316 ~ 53043540 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2005744
acagcgctacagggagacaggatggacagctgatcgtcctcgcagtggcagaccaagtgtaacaacacctgcacaggatcggtacatccgaacatcacacctgcgggacaggtaccgGATGTCAatcaacaactgcccgagttacaccaggaacacacaatccatccatcagtgctcagaatgtccgcaataggctgagagaggattgactgagggcttgtaggc

Function

NR:

description
Transposable element Tc1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2005744 True 225 lncRNA 0.54 1 53043316 53043540

Neighbor

gene id symbol gene type direction distance location
LOC110500702 LOC106608597 coding upstream 46681 52989362 ~ 52996635 (+)
LOC110500701 LOC106608599 coding upstream 72000 52969508 ~ 52971316 (+)
LOC110500700 LOC106608599 coding upstream 79356 52962132 ~ 52963960 (+)
LOC110500695 LOC106608687 coding upstream 1488486 51509283 ~ 51554830 (+)
LOC110500694 LOC106608686 coding upstream 1536171 51501598 ~ 51507145 (+)
LOC110500711 LOC106608589 coding downstream 62017 53105557 ~ 53139436 (+)
si:dkey-28a3.2 LOC106608587 coding downstream 105279 53148819 ~ 53159292 (+)
LOC110500717 LOC106608585 coding downstream 120571 53164111 ~ 53214983 (+)
LOC110500719 LOC106608586 coding downstream 171689 53215229 ~ 53245179 (+)
cth1 LOC106608603 coding downstream 205134 53248674 ~ 53250658 (+)
G1751741 NA non-coding upstream 31855 53009560 ~ 53011461 (+)
G1751739 NA non-coding upstream 35919 53007136 ~ 53007397 (+)
G1751738 NA non-coding upstream 42119 53000674 ~ 53001197 (+)
G1751729 NA non-coding upstream 65346 52977769 ~ 52977970 (+)
G1751727 NA non-coding upstream 67167 52975918 ~ 52976149 (+)
G1751760 NA non-coding downstream 652 53044192 ~ 53044412 (+)
G1751761 NA non-coding downstream 1177 53044717 ~ 53044917 (+)
G1751764 NA non-coding downstream 6690 53050230 ~ 53050461 (+)
G1751766 NA non-coding downstream 17808 53061348 ~ 53062482 (+)
G1751787 NA non-coding downstream 48977 53092517 ~ 53138460 (+)
G1751699 LOC106608599 other upstream 70933 52962449 ~ 52972383 (+)
G1750050 NA other upstream 846309 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 948211 52094709 ~ 52095105 (+)
G1750012 NA other upstream 964314 52071600 ~ 52079002 (+)
G1749650 NA other upstream 1592841 51418969 ~ 51450475 (+)
LOC110500722 NA other downstream 208209 53251413 ~ 53256660 (+)
LOC110500735 ablim2 other downstream 1163158 54206483 ~ 54342581 (+)
G1753100 NA other downstream 1958039 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 2547065 55590450 ~ 55592100 (+)
G1755158 NA other downstream 3342867 56386407 ~ 56387622 (+)

Expression


Co-expression Network