Gene
RNA
| Item | Value |
|---|---|
| gene id | G1751865 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 53260365 ~ 53260708 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: SCAN domain-containing protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2005864 | True | 344 | lncRNA | 0.45 | 1 | 53260365 | 53260708 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500722 | NA | coding | upstream | 3705 | 53251413 ~ 53256660 (+) |
| cth1 | LOC106608603 | coding | upstream | 9707 | 53248674 ~ 53250658 (+) |
| LOC110500719 | LOC106608586 | coding | upstream | 15186 | 53215229 ~ 53245179 (+) |
| LOC110500717 | LOC106608585 | coding | upstream | 45382 | 53164111 ~ 53214983 (+) |
| si:dkey-28a3.2 | LOC106608587 | coding | upstream | 101073 | 53148819 ~ 53159292 (+) |
| LOC110500887 | LOC106608584 | coding | downstream | 7805 | 53268513 ~ 53330654 (+) |
| si:ch73-40a2.1 | LOC106608602 | coding | downstream | 75208 | 53335916 ~ 53347700 (+) |
| rab1ba | LOC100695098 | coding | downstream | 87805 | 53348513 ~ 53367113 (+) |
| LOC110500724 | LOC106608582 | coding | downstream | 145338 | 53406046 ~ 53418358 (+) |
| LOC110500725 | LOC106608581 | coding | downstream | 239415 | 53500123 ~ 53505026 (+) |
| G1751821 | NA | non-coding | upstream | 99541 | 53160568 ~ 53160824 (+) |
| G1751787 | NA | non-coding | upstream | 121905 | 53092517 ~ 53138460 (+) |
| G1751792 | LOC106608591 | non-coding | upstream | 160954 | 53098749 ~ 53099411 (+) |
| G1751863 | NA | non-coding | downstream | 5577 | 53266285 ~ 53266800 (+) |
| G1751883 | NA | non-coding | downstream | 26482 | 53287190 ~ 53287487 (+) |
| G1751905 | NA | non-coding | downstream | 94710 | 53355418 ~ 53356897 (+) |
| G1751906 | NA | non-coding | downstream | 97020 | 53357728 ~ 53360510 (+) |
| G1751922 | NA | non-coding | downstream | 154560 | 53415268 ~ 53415502 (+) |
| G1751699 | LOC106608599 | other | upstream | 287982 | 52962449 ~ 52972383 (+) |
| G1750050 | NA | other | upstream | 1063358 | 52191200 ~ 52197007 (+) |
| G1750030 | LOC106608688 | other | upstream | 1165260 | 52094709 ~ 52095105 (+) |
| G1750012 | NA | other | upstream | 1181363 | 52071600 ~ 52079002 (+) |
| LOC110500735 | ablim2 | other | downstream | 945990 | 54206483 ~ 54342581 (+) |
| G1753100 | NA | other | downstream | 1740871 | 55001579 ~ 55011678 (+) |
| LOC110500754 | LOC106591080 | other | downstream | 2329897 | 55590450 ~ 55592100 (+) |
| G1755158 | NA | other | downstream | 3125699 | 56386407 ~ 56387622 (+) |
| G1755570 | NA | other | downstream | 3533023 | 56793731 ~ 56794574 (+) |
