G1751905


Basic Information

Item Value
gene id G1751905
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 53355418 ~ 53356897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2005905
ccaacacctctaccactaccattacctctaccactacctctaccactaccactaccaccacctctaccaccacctctaccaacacctctaccaacaccactaccaacacctctaccactaccaacacctctaccactaccaacaccaccacctctaccactaccaccacctctaccactaccaccaccaccacctctaccaacaccactaccactacctagaccactaccaacaccatcaccatcaccactaccaacacctctaccactaccaccacctctaccactaccaccacctctaccactaccaccacctctaccaacaccactaccaccacctctaccaacaccactaccactaccaccacctctaccaacaccactaccaccacctctaccaacaccaccacctctaccactaccaactagtcgaccgatttatgatttttcaacgccgatacctattattggaggaccaaaaaaagcagataccgattaatctgacttatttatttatttgtaataatgacaattacaacaatacgaaatgaacacttattttaacttaatataatacatcattaaaaatccatttagcctcaaataaataatgaaacatgttgaaTTTGGTttgaataatgcaaaaacaaagtgttggagaagaaagtaatgtgtgccatgtaaaaaagctaacgttccttaagttccttgctcagaacataagaacatatgaaagttggtgtttccttttaacatgagacttaaatattccaaggtaagaggtttttaggttgtagttaatatagtatttataggactatttctctctctaccatttgtatttcatttacctttgactattggatgttcctataggcactatagtattgcagtatagtgtaacagtatagcttccgtccctctcctcgcctcaaaccaggaacacatcgacaacagccacactcgaagcagcgttacccatcgctccacaaaagtcgcggcccttgcagagcaaggggaataactactcctcagagcgagtgacgtttgaaacgctattagcgcgtacccagctaactagctagccatttcacattggttacaccagccattaggctgaaaggcttgaagtcataaacagcgctgtgcttgcgaggagctgctggcaaaatgcacaaaagtgctgtttgaatgaatgattacgggcctgctgctgctcagtcagactgctctatcaaatcagacttaattataacataataacacacagaaatacgagcctttggtcattaatatggtcgaatccggaaactaccatttcgaaaacaaacttttattatttcagtgaaatacggaaccgttcggtattttatctaacgggtggcatccttaagtctaaatattcttgttacattgcacaaccttcaatgttatgtcataattatgtaaaattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2005905 True 1453 lncRNA 0.42 2 53355418 53356897

Neighbor

gene id symbol gene type direction distance location
si:ch73-40a2.1 LOC106608602 coding upstream 7718 53335916 ~ 53347700 (+)
LOC110500887 LOC106608584 coding upstream 24764 53268513 ~ 53330654 (+)
LOC110500722 NA coding upstream 98758 53251413 ~ 53256660 (+)
cth1 LOC106608603 coding upstream 104760 53248674 ~ 53250658 (+)
LOC110500719 LOC106608586 coding upstream 110239 53215229 ~ 53245179 (+)
LOC110500724 LOC106608582 coding downstream 49149 53406046 ~ 53418358 (+)
LOC110500725 LOC106608581 coding downstream 143226 53500123 ~ 53505026 (+)
LOC110500727 LOC106608576 coding downstream 379107 53736004 ~ 53891327 (+)
LOC118942947 NA coding downstream 412790 53769687 ~ 53773325 (+)
LOC110500729 md2l1 coding downstream 710555 54067452 ~ 54070543 (+)
G1751883 NA non-coding upstream 67931 53287190 ~ 53287487 (+)
G1751863 NA non-coding upstream 88618 53266285 ~ 53266800 (+)
G1751865 NA non-coding upstream 94710 53260365 ~ 53260708 (+)
G1751821 NA non-coding upstream 194594 53160568 ~ 53160824 (+)
G1751906 NA non-coding downstream 831 53357728 ~ 53360510 (+)
G1751922 NA non-coding downstream 58371 53415268 ~ 53415502 (+)
G1751912 NA non-coding downstream 61644 53418541 ~ 53419324 (+)
G1751913 NA non-coding downstream 62496 53419393 ~ 53421659 (+)
G1751925 NA non-coding downstream 68673 53425570 ~ 53425807 (+)
G1751699 LOC106608599 other upstream 383035 52962449 ~ 52972383 (+)
G1750050 NA other upstream 1158411 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 1260313 52094709 ~ 52095105 (+)
G1750012 NA other upstream 1276416 52071600 ~ 52079002 (+)
LOC110500735 ablim2 other downstream 849801 54206483 ~ 54342581 (+)
G1753100 NA other downstream 1644682 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 2233708 55590450 ~ 55592100 (+)
G1755158 NA other downstream 3029510 56386407 ~ 56387622 (+)
G1755570 NA other downstream 3436834 56793731 ~ 56794574 (+)

Expression


Co-expression Network