G1751941


Basic Information

Item Value
gene id G1751941
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 53445827 ~ 53446155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2005947
caatcgagagcatcctgtcaggctgtatcaccgcctggtacggaaactgctccgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcactgggggcaaactacctgccctccaggacacctacaccacctgatgtcacaggaaggccataaagctcatcaaggacaacaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggttagtacaggtgcatcaaagctggggccgagagacagaaaaacagcttctatctcaaggccaacacactgactcaactccagccactttaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2005947 True 329 lncRNA 0.54 1 53445827 53446155

Neighbor

gene id symbol gene type direction distance location
LOC110500724 LOC106608582 coding upstream 27469 53406046 ~ 53418358 (+)
rab1ba LOC100695098 coding upstream 78714 53348513 ~ 53367113 (+)
si:ch73-40a2.1 LOC106608602 coding upstream 98127 53335916 ~ 53347700 (+)
LOC110500887 LOC106608584 coding upstream 115173 53268513 ~ 53330654 (+)
LOC110500722 NA coding upstream 189167 53251413 ~ 53256660 (+)
LOC110500725 LOC106608581 coding downstream 53968 53500123 ~ 53505026 (+)
LOC110500727 LOC106608576 coding downstream 289849 53736004 ~ 53891327 (+)
LOC118942947 NA coding downstream 323532 53769687 ~ 53773325 (+)
LOC110500729 md2l1 coding downstream 621297 54067452 ~ 54070543 (+)
si:dkey-219e21.4 LOC106608570 coding downstream 753567 54199722 ~ 54202902 (+)
G1751940 NA non-coding upstream 88 53445372 ~ 53445739 (+)
G1751925 NA non-coding upstream 20020 53425570 ~ 53425807 (+)
G1751913 NA non-coding upstream 24168 53419393 ~ 53421659 (+)
G1751912 NA non-coding upstream 26503 53418541 ~ 53419324 (+)
G1751922 NA non-coding upstream 30325 53415268 ~ 53415502 (+)
G1751944 NA non-coding downstream 3817 53449972 ~ 53450229 (+)
G1751948 NA non-coding downstream 12451 53458606 ~ 53459094 (+)
G1751953 NA non-coding downstream 22055 53468210 ~ 53468528 (+)
G1751954 NA non-coding downstream 22573 53468728 ~ 53469533 (+)
G1751956 NA non-coding downstream 23455 53469610 ~ 53469910 (+)
G1751699 LOC106608599 other upstream 473444 52962449 ~ 52972383 (+)
G1750050 NA other upstream 1248820 52191200 ~ 52197007 (+)
G1750030 LOC106608688 other upstream 1350722 52094709 ~ 52095105 (+)
G1750012 NA other upstream 1366825 52071600 ~ 52079002 (+)
LOC110500735 ablim2 other downstream 760543 54206483 ~ 54342581 (+)
G1753100 NA other downstream 1555424 55001579 ~ 55011678 (+)
LOC110500754 LOC106591080 other downstream 2144450 55590450 ~ 55592100 (+)
G1755158 NA other downstream 2940252 56386407 ~ 56387622 (+)
G1755570 NA other downstream 3347576 56793731 ~ 56794574 (+)

Expression


Co-expression Network